RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 CRACR2BQ8N4Y2 399 aaPredicted RBP17.78■□□□□ 0.44
RDX-209ENST00000530131 RBM28Q9NW13 759 aaKnown RBP17.78■□□□□ 0.44
RDX-209ENST00000530131 PI4KBQ9UBF8 816 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 AKR1B1P15121 316 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 PNMA1Q8ND90 353 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 FBXO18Q8NFZ0 1043 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 AIFM3Q96NN9 605 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 MAP3K14Q99558 947 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 TMEM47Q9BQJ4 181 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 KAT14Q9H8E8 782 aa17.78■□□□□ 0.44
RDX-209ENST00000530131 CNTNAP1P78357 1384 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 CLRN2A0PK11 232 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 UBE2Q2LH0YL09 131 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 SSRP1Q08945 709 aaKnown RBP17.77■□□□□ 0.44
RDX-209ENST00000530131 FKBP1CQ5VVH2 108 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 TMTC3Q6ZXV5 915 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 TMEM87AQ8NBN3 555 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 CEP95Q96GE4 821 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 C8orf76Q96K31 380 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 SYT17Q9BSW7 474 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 SLC26A6Q9BXS9 759 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 TMOD2Q9NZR1 351 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 ZNF541Q9H0D2 1346 aa17.77■□□□□ 0.44
RDX-209ENST00000530131 TRAK2O60296 914 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 PLEKHA8P1O95397 391 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 DNM1Q05193 864 aaKnown RBP17.76■□□□□ 0.43
RDX-209ENST00000530131 OTUD7BQ6GQQ9 843 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 CMTR1Q8N1G2 835 aaKnown RBP17.76■□□□□ 0.43
RDX-209ENST00000530131 ALG1Q9BT22 464 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 MYOZ2Q9NPC6 264 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 WNT10BO00744 389 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 GUCY1A2P33402 732 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 EIF6P56537 245 aaKnown RBP17.76■□□□□ 0.43
RDX-209ENST00000530131 GUCY1B3Q02153 619 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 DPF2Q92785 391 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 ZSCAN16Q9H4T2 348 aaPredicted RBP17.76■□□□□ 0.43
RDX-209ENST00000530131 GJB4Q9NTQ9 266 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 STX8Q9UNK0 236 aa17.76■□□□□ 0.43
RDX-209ENST00000530131 TCP10L2B9ZVM9 353 aa17.75■□□□□ 0.43
RDX-209ENST00000530131 PRPF40AO75400 957 aaKnown RBP17.75■□□□□ 0.43
RDX-209ENST00000530131 GMPSP49915 693 aaPredicted RBP17.75■□□□□ 0.43
RDX-209ENST00000530131 GRM4Q14833 912 aa17.75■□□□□ 0.43
RDX-209ENST00000530131 TATDN1Q6P1N9 297 aa17.75■□□□□ 0.43
RDX-209ENST00000530131 FAM173BQ6P4H8 233 aa17.75■□□□□ 0.43
RDX-209ENST00000530131 FOXP4Q8IVH2 680 aaPredicted RBP17.75■□□□□ 0.43
RDX-209ENST00000530131 ZSCAN29Q8IWY8 852 aaPredicted RBP17.75■□□□□ 0.43
RDX-209ENST00000530131 CTCFLQ8NI51 663 aaPredicted RBP17.75■□□□□ 0.43
RDX-209ENST00000530131 FAM151AQ8WW52 585 aa17.75■□□□□ 0.43
RDX-209ENST00000530131 RNF26Q9BY78 433 aaPredicted RBP17.75■□□□□ 0.43
RDX-209ENST00000530131 MTMR4Q9NYA4 1195 aa17.75■□□□□ 0.43
RDX-209ENST00000530131 CNTNAP5Q8WYK1 1306 aa17.75■□□□□ 0.43
RDX-209ENST00000530131 MYH4Q9Y623 1939 aa17.75■□□□□ 0.43
RDX-209ENST00000530131 FAM196BA6NMK8 535 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 NBPF9Q3BBW0 867 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 ARHGAP27Q6ZUM4 889 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 TRIM22Q8IYM9 498 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 CCDC17Q96LX7 622 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 GDPD2Q9HCC8 539 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 DEXIO95424 95 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 EGFRP00533 1210 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 TOP1P11387 765 aaKnown RBP17.74■□□□□ 0.43
RDX-209ENST00000530131 LMNB1P20700 586 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 CCDC82Q8N4S0 544 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 SRBD1Q8N5C6 995 aaKnown RBP17.74■□□□□ 0.43
RDX-209ENST00000530131 WASF1Q92558 559 aa17.74■□□□□ 0.43
RDX-209ENST00000530131 PRPF3O43395 683 aaKnown RBP17.73■□□□□ 0.43
RDX-209ENST00000530131 KIF5BP33176 963 aa17.73■□□□□ 0.43
RDX-209ENST00000530131 PKN1Q16512 942 aa17.73■□□□□ 0.43
RDX-209ENST00000530131 KRT40Q6A162 431 aa17.73■□□□□ 0.43
RDX-209ENST00000530131 USP48Q86UV5 1035 aa17.73■□□□□ 0.43
RDX-209ENST00000530131 FAM83AQ86UY5 434 aa17.73■□□□□ 0.43
RDX-209ENST00000530131 CSRNP1Q96S65 589 aa17.73■□□□□ 0.43
RDX-209ENST00000530131 PGAP2Q9UHJ9 254 aa17.73■□□□□ 0.43
RDX-209ENST00000530131 MAD2L2Q9UI95 211 aa17.73■□□□□ 0.43
RDX-209ENST00000530131 BAZ2BQ9UIF8 2168 aaKnown RBP17.73■□□□□ 0.43
RDX-209ENST00000530131 SKOR2Q2VWA4 1001 aaPredicted RBP17.72■□□□□ 0.43
RDX-209ENST00000530131 CLEC10AQ8IUN9 316 aa17.72■□□□□ 0.43
RDX-209ENST00000530131 MICALL2Q8IY33 904 aa17.72■□□□□ 0.43
RDX-209ENST00000530131 MYO1BO43795 1136 aa17.72■□□□□ 0.43
RDX-209ENST00000530131 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
RDX-209ENST00000530131 STAG2Q8N3U4 1231 aa17.72■□□□□ 0.43
RDX-209ENST00000530131 VEZTQ9HBM0 779 aa17.72■□□□□ 0.43
RDX-209ENST00000530131 GJA3Q9Y6H8 435 aa17.72■□□□□ 0.43
RDX-209ENST00000530131 PALM3A6NDB9 673 aaPredicted RBP17.71■□□□□ 0.43
RDX-209ENST00000530131 KIF28PB7ZC32 967 aa17.71■□□□□ 0.43
RDX-209ENST00000530131 YBX3P16989 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
RDX-209ENST00000530131 KRT85P78386 507 aa17.71■□□□□ 0.43
RDX-209ENST00000530131 SHROOM1Q2M3G4 852 aaPredicted RBP17.71■□□□□ 0.43
RDX-209ENST00000530131 SLC35G1Q2M3R5 365 aa17.71■□□□□ 0.43
RDX-209ENST00000530131 KLHL40Q2TBA0 621 aa17.71■□□□□ 0.43
RDX-209ENST00000530131 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
RDX-209ENST00000530131 RASGRP2Q7LDG7 609 aa17.71■□□□□ 0.43
RDX-209ENST00000530131 SHISA4Q96DD7 197 aa17.71■□□□□ 0.43
RDX-209ENST00000530131 HERC5Q9UII4 1024 aaKnown RBP17.71■□□□□ 0.43
RDX-209ENST00000530131 CNOT7Q9UIV1 285 aaKnown RBP17.71■□□□□ 0.43
RDX-209ENST00000530131 FIBPO43427 364 aa17.7■□□□□ 0.42
RDX-209ENST00000530131 TTLL1O95922 423 aa17.7■□□□□ 0.42
RDX-209ENST00000530131 NCLP19338 710 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms