RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 GJA8P48165 433 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 SEPT2Q15019 361 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 LRRFIP1Q32MZ4 808 aaKnown RBP13.99□□□□□ -0.17
HIF3A-209ENST00000525854 SLFNL1Q499Z3 407 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 TMEM179Q6ZVK1 233 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 KBTBD3Q8NAB2 608 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 ACER1Q8TDN7 264 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 RBPJLQ9UBG7 517 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 PCDHB15Q9Y5E8 787 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 SLC4A4Q9Y6R1 1079 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 CENPFP49454 3210 aa13.99□□□□□ -0.17
HIF3A-209ENST00000525854 TTC41PQ6P2S7 1318 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 MGAMO43451 1857 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L12C9JPN9 530 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 USP17L21D6R901 530 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 ERC2O15083 957 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 ZFYP08048 801 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-209ENST00000525854 VCAM1P19320 739 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 GUCY1A2P33402 732 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 ERVK-9P63128 1117 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 ERVK-24P63145 666 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 CCNA1P78396 465 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 C12orf60Q5U649 245 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 CATSPERGQ6ZRH7 1159 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 SOCS4Q8WXH5 440 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 CCDC17Q96LX7 622 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 UNC93B1Q9H1C4 597 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 TXNRD2Q9NNW7 524 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
HIF3A-209ENST00000525854 GJD2Q9UKL4 321 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 RABGAP1Q9Y3P9 1069 aa13.98□□□□□ -0.17
HIF3A-209ENST00000525854 DDX60LQ5H9U9 1706 aaKnown RBP13.98□□□□□ -0.17
HIF3A-209ENST00000525854 NAV1Q8NEY1 1877 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 HMGCRP04035 888 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 EVX2Q03828 476 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 SLC44A5Q8NCS7 719 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 U2AF1L4Q8WU68 220 aaKnown RBP13.97□□□□□ -0.17
HIF3A-209ENST00000525854 GCC1Q96CN9 775 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 SHISA4Q96DD7 197 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 DYNLL2Q96FJ2 89 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 NUDT12Q9BQG2 462 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 PAGR1Q9BTK6 254 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 PUS7LQ9H0K6 701 aaKnown RBP13.97□□□□□ -0.17
HIF3A-209ENST00000525854 SH2D4AQ9H788 454 aa13.97□□□□□ -0.17
HIF3A-209ENST00000525854 CWC22Q9HCG8 908 aaKnown RBP13.97□□□□□ -0.17
HIF3A-209ENST00000525854 ARPP21Q9UBL0 812 aaPredicted RBP13.97□□□□□ -0.17
HIF3A-209ENST00000525854 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
HIF3A-209ENST00000525854 GLRX3O76003 335 aaKnown RBP13.96□□□□□ -0.17
HIF3A-209ENST00000525854 SGPL1O95470 568 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 CHGBP05060 677 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 XRCC5P13010 732 aaKnown RBP13.96□□□□□ -0.17
HIF3A-209ENST00000525854 CDK8P49336 464 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 TSHZ3Q63HK5 1081 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 GIMAP6Q6P9H5 292 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 LBX2Q6XYB7 198 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 C16orf86Q6ZW13 317 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 TRMT44Q8IYL2 757 aaKnown RBP13.96□□□□□ -0.17
HIF3A-209ENST00000525854 APPBP2Q92624 585 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 STRBPQ96SI9 672 aaKnown RBP13.96□□□□□ -0.17
HIF3A-209ENST00000525854 RPAP3Q9H6T3 665 aaPredicted RBP13.96□□□□□ -0.17
HIF3A-209ENST00000525854 ARHGEF10LQ9HCE6 1279 aa13.96□□□□□ -0.17
HIF3A-209ENST00000525854 CYP2D7A0A087X1C5 515 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 AKR1B1P15121 316 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 GNAT2P19087 354 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 ICA1Q05084 483 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 Q3C1V9 767 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 CTR9Q6PD62 1173 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 PLEKHH3Q7Z736 793 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 LPAR1Q92633 364 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
HIF3A-209ENST00000525854 PAK6Q9NQU5 681 aaPredicted RBP13.95□□□□□ -0.18
HIF3A-209ENST00000525854 HOXC10Q9NYD6 342 aa13.95□□□□□ -0.18
HIF3A-209ENST00000525854 A0A1W2PRG0 241 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 PEX10O60683 326 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 FARP2O94887 1054 aaPredicted RBP13.94□□□□□ -0.18
HIF3A-209ENST00000525854 TFRCP02786 760 aaKnown RBP13.94□□□□□ -0.18
HIF3A-209ENST00000525854 CYP2B6P20813 491 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 RGS2P41220 211 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 AAMPQ13685 434 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 COG2Q14746 738 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 SBK1Q52WX2 424 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 POTEEQ6S8J3 1075 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 GPR142Q7Z601 462 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 OSBP2Q969R2 916 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 DEFB118Q96PH6 123 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 CRBNQ96SW2 442 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 HTATIP2Q9BUP3 242 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.94□□□□□ -0.18
HIF3A-209ENST00000525854 PORCNQ9H237 461 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 KANSL2Q9H9L4 492 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 TMX2Q9Y320 296 aa13.94□□□□□ -0.18
HIF3A-209ENST00000525854 RPTORQ8N122 1335 aa13.93□□□□□ -0.18
HIF3A-209ENST00000525854 BRCA2P51587 3418 aa13.93□□□□□ -0.18
HIF3A-209ENST00000525854 SPDYE16A6NNV3 312 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-209ENST00000525854 GPAA1O43292 621 aa13.93□□□□□ -0.18
HIF3A-209ENST00000525854 MX1P20591 662 aa13.93□□□□□ -0.18
HIF3A-209ENST00000525854 HDAC1Q13547 482 aaPredicted RBP13.93□□□□□ -0.18
HIF3A-209ENST00000525854 UBE2Q1Q7Z7E8 422 aa13.93□□□□□ -0.18
HIF3A-209ENST00000525854 PI4K2BQ8TCG2 481 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms