RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 KLK14Q9P0G3 267 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 CHMP3Q9Y3E7 222 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 PTCH2Q9Y6C5 1203 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 C5P01031 1676 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 RGPD8O14715 1765 aaPredicted RBP4.85□□□□□ -1.63
CSDE1-209ENST00000525132 WNK3Q9BYP7 1800 aa4.85□□□□□ -1.63
CSDE1-209ENST00000525132 RELNP78509 3460 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 RIF1Q5UIP0 2472 aaKnown RBP4.84□□□□□ -1.63
CSDE1-209ENST00000525132 ZNF609O15014 1411 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 DCDC2BA2VCK2 349 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 GJA8P48165 433 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 TMF1P82094 1093 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 SRSF1Q07955 248 aaKnown RBP eCLIP4.84□□□□□ -1.63
CSDE1-209ENST00000525132 SFSWAPQ12872 951 aaKnown RBP4.84□□□□□ -1.63
CSDE1-209ENST00000525132 PDE3AQ14432 1141 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 HIF1AQ16665 826 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 C11orf91Q3C1V1 193 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 SOWAHCQ53LP3 525 aaPredicted RBP4.84□□□□□ -1.63
CSDE1-209ENST00000525132 NLGN1Q8N2Q7 840 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 TTLL6Q8N841 843 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 HELQQ8TDG4 1101 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 TRERF1Q96PN7 1200 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 TRAIPQ9BWF2 469 aa4.84□□□□□ -1.63
CSDE1-209ENST00000525132 SMG1Q96Q15 3661 aaKnown RBP4.84□□□□□ -1.64
CSDE1-209ENST00000525132 C4AP0C0L4 1744 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 MON2Q7Z3U7 1717 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 COL4A4P53420 1690 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-209ENST00000525132 TAF4O00268 1085 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 ZBTB39O15060 712 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 ARAFP10398 606 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 CD33P20138 364 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 MX2P20592 715 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 MAP2K3P46734 347 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 AAK1Q2M2I8 961 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 AKNAD1Q5T1N1 836 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 ZNF468Q5VIY5 522 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-209ENST00000525132 LYPD4Q6UWN0 246 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 USP50Q70EL3 339 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-209ENST00000525132 SP8Q8IXZ3 490 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 SLC30A3Q99726 388 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 MKNK1Q9BUB5 465 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 BRD7Q9NPI1 651 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 ANKIB1Q9P2G1 1089 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 PHF24Q9UPV7 400 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 DNMT3AQ9Y6K1 912 aaPredicted RBP4.83□□□□□ -1.64
CSDE1-209ENST00000525132 FAM186AA6NE01 2351 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 C2CD3Q4AC94 2353 aa4.83□□□□□ -1.64
CSDE1-209ENST00000525132 TENM4Q6N022 2769 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 PALLDQ8WX93 1383 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 ARHGAP6O43182 974 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 MICAL2O94851 1124 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 CELA2BP08218 269 aaPredicted RBP4.82□□□□□ -1.64
CSDE1-209ENST00000525132 ALADP13716 330 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 RING1Q06587 406 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 GPAT2Q6NUI2 795 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 FOXR1Q6PIV2 292 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 SLCO4C1Q6ZQN7 724 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 WAPLQ7Z5K2 1190 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 FCHSD1Q86WN1 690 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 RASAL3Q86YV0 1011 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 AEBP1Q8IUX7 1158 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 TAOK3Q9H2K8 898 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 ANKFY1Q9P2R3 1169 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 EGFL7Q9UHF1 273 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 GNEQ9Y223 722 aaKnown RBP4.82□□□□□ -1.64
CSDE1-209ENST00000525132 KCNMB2Q9Y691 235 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 LTN1O94822 1766 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 ZZEF1O43149 2961 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 ABCC6O95255 1503 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 ALPK3Q96L96 1907 aa4.82□□□□□ -1.64
CSDE1-209ENST00000525132 NSD3Q9BZ95 1437 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 KHNYNO15037 678 aaKnown RBP4.81□□□□□ -1.64
CSDE1-209ENST00000525132 HOXD8P13378 290 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-209ENST00000525132 TM4SF4P48230 202 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 IDH3AP50213 366 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 TRIP4Q15650 581 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-209ENST00000525132 C2orf69Q8N8R5 385 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 TNFRSF25Q93038 417 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 IFT43Q96FT9 208 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 ERO1AQ96HE7 468 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 GSX2Q9BZM3 304 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 GBA2Q9HCG7 927 aaPredicted RBP4.81□□□□□ -1.64
CSDE1-209ENST00000525132 DLL3Q9NYJ7 618 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 MARK1Q9P0L2 795 aa4.81□□□□□ -1.64
CSDE1-209ENST00000525132 NSD2O96028 1365 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 LTBP3Q9NS15 1303 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 UBR5O95071 2799 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-209ENST00000525132 UBR3Q6ZT12 1888 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 SHTN1A0MZ66 631 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 LCHNA4D1U4 455 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 ADARB2-AS1A8MUL3 147 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 SHISA8B8ZZ34 492 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 OIP5O43482 229 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 SIN3BO75182 1162 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 IGHA2P01877 340 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 ARSDP51689 593 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 NAA30Q147X3 362 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-209ENST00000525132 TREML1Q86YW5 311 aa4.8□□□□□ -1.64
CSDE1-209ENST00000525132 GTF3C2Q8WUA4 911 aaPredicted RBP4.8□□□□□ -1.64
CSDE1-209ENST00000525132 PRRX2Q99811 253 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms