RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 KIF7Q2M1P5 1343 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 UBN2Q6ZU65 1347 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 CDHR2Q9BYE9 1310 aa8.5□□□□□ -1.05
VPS13B-211ENST00000522802 PAPPA2Q9BXP8 1791 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 GNAT3A8MTJ3 354 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 ADM5C9JUS6 153 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 GPR25O00155 361 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 EFSO43281 561 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 RAD17O75943 681 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 EGFRP00533 1210 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 HOXA10P31260 410 aaPredicted RBP8.49□□□□□ -1.05
VPS13B-211ENST00000522802 CDC37L1Q7L3B6 337 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 USP48Q86UV5 1035 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 ETFBKMTQ8IXQ9 262 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 TRERF1Q96PN7 1200 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 EGFL7Q9UHF1 273 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 ATXN7L1Q9ULK2 861 aaPredicted RBP8.49□□□□□ -1.05
VPS13B-211ENST00000522802 ZNRF3Q9ULT6 936 aa8.49□□□□□ -1.05
VPS13B-211ENST00000522802 DDX60Q8IY21 1712 aaKnown RBP8.49□□□□□ -1.05
VPS13B-211ENST00000522802 IBTKQ9P2D0 1353 aaPredicted RBP8.48□□□□□ -1.05
VPS13B-211ENST00000522802 RANBP2P49792 3224 aaKnown RBP8.48□□□□□ -1.05
VPS13B-211ENST00000522802 ANKRD36CQ5JPF3 1778 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 KDM3BQ7LBC6 1761 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 BTBD11A6QL63 1104 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 MICAL2O94851 1124 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 MAPTP10636 758 aaKnown RBP8.48□□□□□ -1.05
VPS13B-211ENST00000522802 NPR3P17342 541 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 SERPINB4P48594 390 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 FXR1P51114 621 aaKnown RBP eCLIP8.48□□□□□ -1.05
VPS13B-211ENST00000522802 ZNF157P51786 506 aaPredicted RBP8.48□□□□□ -1.05
VPS13B-211ENST00000522802 GAS6Q14393 721 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 GCC1Q96CN9 775 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 GBA2Q9HCG7 927 aaPredicted RBP8.48□□□□□ -1.05
VPS13B-211ENST00000522802 PHF24Q9UPV7 400 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 COL4A1P02462 1669 aa8.48□□□□□ -1.05
VPS13B-211ENST00000522802 COL6A3P12111 3177 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 YDJCA8MPS7 323 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 OPLAHO14841 1288 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 ZBTB39O15060 712 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 DIAPH1O60610 1272 aaKnown RBP8.47□□□□□ -1.05
VPS13B-211ENST00000522802 GPTP24298 496 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 INPP5BP32019 993 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 TYRO3Q06418 890 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 MTMR3Q13615 1198 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 LAMC2Q13753 1193 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 KRT26Q7Z3Y9 468 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 TREML1Q86YW5 311 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 ABHD17AQ96GS6 310 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 CEP63Q96MT8 703 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 CRAMP1Q96RY5 1269 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 CSRNP1Q96S65 589 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 BCL2L13Q9BXK5 485 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 SCN9AQ15858 1988 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 A0A0C4DFX4 3053 aa8.47□□□□□ -1.05
VPS13B-211ENST00000522802 KHNYNO15037 678 aaKnown RBP8.46□□□□□ -1.06
VPS13B-211ENST00000522802 ICMTO60725 284 aa8.46□□□□□ -1.06
VPS13B-211ENST00000522802 ABL1P00519 1130 aa8.46□□□□□ -1.06
VPS13B-211ENST00000522802 SNRPA1P09661 255 aaKnown RBP8.46□□□□□ -1.06
VPS13B-211ENST00000522802 TBC1D10BQ4KMP7 808 aaPredicted RBP8.46□□□□□ -1.06
VPS13B-211ENST00000522802 RASAL3Q86YV0 1011 aa8.46□□□□□ -1.06
VPS13B-211ENST00000522802 COL25A1Q9BXS0 654 aaPredicted RBP8.46□□□□□ -1.06
VPS13B-211ENST00000522802 RTFDC1Q9BY42 306 aaPredicted RBP8.46□□□□□ -1.06
VPS13B-211ENST00000522802 NYXQ9GZU5 481 aa8.46□□□□□ -1.06
VPS13B-211ENST00000522802 CNOT7Q9UIV1 285 aaKnown RBP8.46□□□□□ -1.06
VPS13B-211ENST00000522802 ATP6V0A2Q9Y487 856 aa8.46□□□□□ -1.06
VPS13B-211ENST00000522802 ABCC4O15439 1325 aa8.46□□□□□ -1.06
VPS13B-211ENST00000522802 ASTN2O75129 1339 aaPredicted RBP8.46□□□□□ -1.06
VPS13B-211ENST00000522802 TRIOBPQ9H2D6 2365 aa8.46□□□□□ -1.06
VPS13B-211ENST00000522802 DCDC2BA2VCK2 349 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 PATL2C9JE40 543 aaKnown RBP8.45□□□□□ -1.06
VPS13B-211ENST00000522802 NTSR2O95665 410 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 IDH3AP50213 366 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 KRT76Q01546 638 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 KIAA2012Q0VF49 1180 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 ZNF211Q13398 564 aaPredicted RBP8.45□□□□□ -1.06
VPS13B-211ENST00000522802 ECM1Q16610 540 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 RNFT1Q5M7Z0 435 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 SUSD4Q5VX71 490 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 NGEFQ8N5V2 710 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 ZNF296Q8WUU4 475 aaPredicted RBP8.45□□□□□ -1.06
VPS13B-211ENST00000522802 RBM17Q96I25 401 aaKnown RBP8.45□□□□□ -1.06
VPS13B-211ENST00000522802 PHACTR3Q96KR7 559 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 BRD7Q9NPI1 651 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 ANO2Q9NQ90 1003 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 MAP3K15Q6ZN16 1313 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 CEP290O15078 2479 aa8.45□□□□□ -1.06
VPS13B-211ENST00000522802 U2SURPO15042 1029 aaKnown RBP8.44□□□□□ -1.06
VPS13B-211ENST00000522802 TBC1D8O95759 1140 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 GRNP28799 593 aaKnown RBP8.44□□□□□ -1.06
VPS13B-211ENST00000522802 CTBSQ01459 385 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 SFSWAPQ12872 951 aaKnown RBP8.44□□□□□ -1.06
VPS13B-211ENST00000522802 TNIP1Q15025 636 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 DPP8Q6V1X1 898 aaPredicted RBP8.44□□□□□ -1.06
VPS13B-211ENST00000522802 TTLL7Q6ZT98 887 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 MCM10Q7L590 875 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 C2orf69Q8N8R5 385 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 VPS33BQ9H267 617 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 GGA3Q9NZ52 723 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 KNSTRNQ9Y448 316 aa8.44□□□□□ -1.06
VPS13B-211ENST00000522802 CUL9Q8IWT3 2517 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms