RNA–Protein interactions for RNA: ENST00000521977.1

SHPRH-209, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5

Gene SHPRH, Length 927 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-209ENST00000521977 LLPHQ9BRT6 129 aaKnown RBP11.18□□□□□ -0.62
SHPRH-209ENST00000521977 MYOZ2Q9NPC6 264 aa11.18□□□□□ -0.62
SHPRH-209ENST00000521977 ZNF70Q9UC06 446 aaPredicted RBP11.18□□□□□ -0.62
SHPRH-209ENST00000521977 PLIN4Q96Q06 1357 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 ERICH2A1L162 156 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 DDTLA6NHG4 134 aaPredicted RBP11.17□□□□□ -0.62
SHPRH-209ENST00000521977 WNT10BO00744 389 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 HLA-DOAP06340 250 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 NOVP48745 357 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 GMPSP49915 693 aaPredicted RBP11.17□□□□□ -0.62
SHPRH-209ENST00000521977 CACNB3P54284 484 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 RAB3GAP1Q15042 981 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 CCDC178Q5BJE1 867 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 GPR153Q6NV75 609 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 IQCA1Q86XH1 822 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 ENAHQ8N8S7 591 aaPredicted RBP11.17□□□□□ -0.62
SHPRH-209ENST00000521977 SLC44A5Q8NCS7 719 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 ANKS1AQ92625 1134 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 ZKSCAN3Q9BRR0 538 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 UBAC1Q9BSL1 405 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 MKNK2Q9HBH9 465 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 SWAP70Q9UH65 585 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 SERPINB13Q9UIV8 391 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 SMC3Q9UQE7 1217 aa11.17□□□□□ -0.62
SHPRH-209ENST00000521977 SHTN1A0MZ66 631 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 TSPY2A6NKD2 308 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 GOLGA8BA8MQT2 603 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 KIF3CO14782 793 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 CTDNEP1O95476 244 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 GJB2P29033 226 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 NUCB2P80303 420 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 TFAP4Q01664 338 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 FAM47AQ5JRC9 791 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 RCSD1Q6JBY9 416 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 FAM83AQ86UY5 434 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 DGKHQ86XP1 1220 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 ZNF444Q8N0Y2 327 aaPredicted RBP11.16□□□□□ -0.62
SHPRH-209ENST00000521977 GPC2Q8N158 579 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 NSUN7Q8NE18 718 aaKnown RBP11.16□□□□□ -0.62
SHPRH-209ENST00000521977 NEDD1Q8NHV4 660 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 FAM151AQ8WW52 585 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 DNAJC18Q9H819 358 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 TMOD2Q9NZR1 351 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 PI4KBQ9UBF8 816 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 CNOT7Q9UIV1 285 aaKnown RBP11.16□□□□□ -0.62
SHPRH-209ENST00000521977 CNTNAP1P78357 1384 aa11.16□□□□□ -0.62
SHPRH-209ENST00000521977 GREB1LQ9C091 1923 aaPredicted RBP11.15□□□□□ -0.62
SHPRH-209ENST00000521977 CCDC69A6NI79 296 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 ZBTB43O43298 467 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 SHMT1P34896 483 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 CCT2P78371 535 aaKnown RBP11.15□□□□□ -0.62
SHPRH-209ENST00000521977 TCP10Q12799 353 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 NFXL1Q6ZNB6 911 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 FOXP4Q8IVH2 680 aaPredicted RBP11.15□□□□□ -0.62
SHPRH-209ENST00000521977 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 IL17RBQ9NRM6 502 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 FAM217BQ9NTX9 383 aaPredicted RBP11.15□□□□□ -0.62
SHPRH-209ENST00000521977 PGAP2Q9UHJ9 254 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 ZDHHC9Q9Y397 364 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 GJA3Q9Y6H8 435 aa11.15□□□□□ -0.62
SHPRH-209ENST00000521977 IGKV6D-41A0A0C4DH26 115 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 CLRN2A0PK11 232 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 SOCS7O14512 581 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 MYO1BO43795 1136 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 DHX16O60231 1041 aaKnown RBP11.14□□□□□ -0.63
SHPRH-209ENST00000521977 NMT2O60551 498 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 JAK2O60674 1132 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 DDAH1O94760 285 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 BRD1O95696 1058 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 EGFRP00533 1210 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 TSPY3P0CV98 308 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 TSPY8P0CW00 308 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 PDIA4P13667 645 aaKnown RBP11.14□□□□□ -0.63
SHPRH-209ENST00000521977 METAP2P50579 478 aaKnown RBP eCLIP11.14□□□□□ -0.63
SHPRH-209ENST00000521977 HMGN5P82970 282 aaKnown RBP11.14□□□□□ -0.63
SHPRH-209ENST00000521977 MMRN1Q13201 1228 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 PKP1Q13835 747 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 NBPF9Q3BBW0 867 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 IFIT1BQ5T764 474 aaKnown RBP11.14□□□□□ -0.63
SHPRH-209ENST00000521977 TATDN1Q6P1N9 297 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 ZNF654Q8IZM8 581 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.14□□□□□ -0.63
SHPRH-209ENST00000521977 NCOA5Q9HCD5 579 aaKnown RBP11.14□□□□□ -0.63
SHPRH-209ENST00000521977 GPRC5DQ9NZD1 345 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 RNF181Q9P0P0 153 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 UTRNP46939 3433 aa11.14□□□□□ -0.63
SHPRH-209ENST00000521977 MYH8P13535 1937 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 PTPDC1A2A3K4 754 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 GOLGA8AA7E2F4 631 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 TCP10L2B9ZVM9 353 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 SYT1P21579 422 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 CDC27P30260 824 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 TROAPQ12815 778 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 PPP2R5BQ15173 497 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 NTRK3Q16288 839 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 KIF4BQ2VIQ3 1234 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 C9orf131Q5VYM1 1079 aa11.13□□□□□ -0.63
SHPRH-209ENST00000521977 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms