RNA–Protein interactions for RNA: ENST00000521540.1

NEFM-205, Transcript of neurofilament medium, humanhuman

TSL 5

Gene NEFM, Length 1,885 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-205ENST00000521540 NRXN2Q9P2S2 1712 aa15.26■□□□□ 0.03
NEFM-205ENST00000521540 COL1A1P02452 1464 aaPredicted RBP15.26■□□□□ 0.03
NEFM-205ENST00000521540 SFPQP23246 707 aaKnown RBP eCLIP15.26■□□□□ 0.03
NEFM-205ENST00000521540 LONRF3Q496Y0 759 aa15.26■□□□□ 0.03
NEFM-205ENST00000521540 IFIT1BQ5T764 474 aaKnown RBP15.26■□□□□ 0.03
NEFM-205ENST00000521540 NYAP1Q6ZVC0 841 aa15.26■□□□□ 0.03
NEFM-205ENST00000521540 TMC6Q7Z403 805 aa15.26■□□□□ 0.03
NEFM-205ENST00000521540 CCAR2Q8N163 923 aaKnown RBP15.26■□□□□ 0.03
NEFM-205ENST00000521540 CCDC112Q8NEF3 446 aa15.26■□□□□ 0.03
NEFM-205ENST00000521540 SDR42E1Q8WUS8 393 aa15.26■□□□□ 0.03
NEFM-205ENST00000521540 BRMS1Q9HCU9 246 aa15.26■□□□□ 0.03
NEFM-205ENST00000521540 KCNJ14Q9UNX9 436 aa15.26■□□□□ 0.03
NEFM-205ENST00000521540 MYH2Q9UKX2 1941 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 LAMB1P07942 1786 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 ORC4O43929 436 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 MMP10P09238 476 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 MDM2Q00987 491 aaPredicted RBP15.25■□□□□ 0.03
NEFM-205ENST00000521540 DDR1Q08345 913 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 PNOCQ13519 176 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 NT5DC1Q5TFE4 455 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 MLKLQ8NB16 471 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 NLRP3Q96P20 1036 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 CRNKL1Q9BZJ0 848 aaKnown RBP15.25■□□□□ 0.03
NEFM-205ENST00000521540 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
NEFM-205ENST00000521540 CCDC88AQ3V6T2 1871 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 COL4A1P02462 1669 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 POLRMTO00411 1230 aaKnown RBP15.25■□□□□ 0.03
NEFM-205ENST00000521540 KRT2P35908 639 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 RPS8P62241 208 aaKnown RBP15.25■□□□□ 0.03
NEFM-205ENST00000521540 ARID5BQ14865 1188 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 ENAHQ8N8S7 591 aaPredicted RBP15.25■□□□□ 0.03
NEFM-205ENST00000521540 ANKRD7Q92527 254 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 SGIP1Q9BQI5 828 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 ATP8A2Q9NTI2 1148 aa15.25■□□□□ 0.03
NEFM-205ENST00000521540 IQSEC3Q9UPP2 1182 aaPredicted RBP15.25■□□□□ 0.03
NEFM-205ENST00000521540 KIAA1551Q9HCM1 1747 aa15.24■□□□□ 0.03
NEFM-205ENST00000521540 TRIM75PA6NK02 468 aa15.24■□□□□ 0.03
NEFM-205ENST00000521540 POSTNQ15063 836 aa15.24■□□□□ 0.03
NEFM-205ENST00000521540 SPTY2D1Q68D10 685 aaPredicted RBP15.24■□□□□ 0.03
NEFM-205ENST00000521540 ZNF710Q8N1W2 664 aa15.24■□□□□ 0.03
NEFM-205ENST00000521540 NSUN4Q96CB9 384 aaKnown RBP15.24■□□□□ 0.03
NEFM-205ENST00000521540 PHF20Q9BVI0 1012 aa15.24■□□□□ 0.03
NEFM-205ENST00000521540 AATFQ9NY61 560 aaKnown RBP eCLIP15.24■□□□□ 0.03
NEFM-205ENST00000521540 PCDHA5Q9Y5H7 936 aa15.24■□□□□ 0.03
NEFM-205ENST00000521540 BAZ2AQ9UIF9 1905 aaKnown RBP15.24■□□□□ 0.03
NEFM-205ENST00000521540 UBE2Q2LH0YL09 131 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 SERPINC1P01008 464 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 LMOD1P29536 600 aaPredicted RBP15.23■□□□□ 0.03
NEFM-205ENST00000521540 HIBADHP31937 336 aaKnown RBP15.23■□□□□ 0.03
NEFM-205ENST00000521540 PTGER2P43116 358 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 UBASH3AP57075 661 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 DYNLL1P63167 89 aaKnown RBP15.23■□□□□ 0.03
NEFM-205ENST00000521540 SBK1Q52WX2 424 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 TPTE2Q6XPS3 522 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 C3orf67Q6ZVT6 689 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 NBPF5PQ86XG9 351 aaPredicted RBP15.23■□□□□ 0.03
NEFM-205ENST00000521540 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 CCDC94Q9BW85 323 aaPredicted RBP15.23■□□□□ 0.03
NEFM-205ENST00000521540 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.23■□□□□ 0.03
NEFM-205ENST00000521540 SARSP49591 514 aaKnown RBP15.23■□□□□ 0.03
NEFM-205ENST00000521540 FUT2Q10981 343 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 CELF1Q92879 486 aaKnown RBP15.23■□□□□ 0.03
NEFM-205ENST00000521540 FERMT2Q96AC1 680 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 HSD3B7Q9H2F3 369 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 SPON1Q9HCB6 807 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 ARPP21Q9UBL0 812 aaPredicted RBP15.23■□□□□ 0.03
NEFM-205ENST00000521540 PCDHB6Q9Y5E3 794 aa15.23■□□□□ 0.03
NEFM-205ENST00000521540 TAF1P21675 1872 aa15.22■□□□□ 0.03
NEFM-205ENST00000521540 NR5A1Q13285 461 aa15.22■□□□□ 0.03
NEFM-205ENST00000521540 PKN1Q16512 942 aa15.22■□□□□ 0.03
NEFM-205ENST00000521540 KIF18AQ8NI77 898 aa15.22■□□□□ 0.03
NEFM-205ENST00000521540 PYM1Q9BRP8 204 aaKnown RBP15.22■□□□□ 0.03
NEFM-205ENST00000521540 CABP5Q9NP86 173 aa15.22■□□□□ 0.03
NEFM-205ENST00000521540 MAN1B1Q9UKM7 699 aa15.22■□□□□ 0.03
NEFM-205ENST00000521540 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
NEFM-205ENST00000521540 PARP3Q9Y6F1 533 aa15.22■□□□□ 0.03
NEFM-205ENST00000521540 POLR2DO15514 142 aaKnown RBP15.21■□□□□ 0.03
NEFM-205ENST00000521540 SERPINB2P05120 415 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 POLD1P28340 1107 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 TROAPQ12815 778 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 MORC3Q14149 939 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 CCDC178Q5BJE1 867 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 ARMCX5Q6P1M9 558 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 TMTC3Q6ZXV5 915 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 FCHSD1Q86WN1 690 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 FOXP4Q8IVH2 680 aaPredicted RBP15.21■□□□□ 0.03
NEFM-205ENST00000521540 VSTM4Q8IW00 320 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 CCDC82Q8N4S0 544 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 CTCFLQ8NI51 663 aaPredicted RBP15.21■□□□□ 0.03
NEFM-205ENST00000521540 ENOX1Q8TC92 643 aaKnown RBP15.21■□□□□ 0.03
NEFM-205ENST00000521540 SERTAD1Q9UHV2 236 aa15.21■□□□□ 0.03
NEFM-205ENST00000521540 ERCC5P28715 1186 aaPredicted RBP15.2■□□□□ 0.02
NEFM-205ENST00000521540 TRAPPC10P48553 1259 aa15.2■□□□□ 0.02
NEFM-205ENST00000521540 MECOMQ03112 1051 aa15.2■□□□□ 0.02
NEFM-205ENST00000521540 PDE4BQ07343 736 aa15.2■□□□□ 0.02
NEFM-205ENST00000521540 ISM2Q6H9L7 571 aa15.2■□□□□ 0.02
NEFM-205ENST00000521540 PDCL2Q8N4E4 241 aa15.2■□□□□ 0.02
NEFM-205ENST00000521540 USP17L12C9JPN9 530 aa15.2■□□□□ 0.02
NEFM-205ENST00000521540 USP17L21D6R901 530 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms