RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 APOBEC3FQ8IUX4 373 aaKnown RBP17.63■□□□□ 0.41
SREK1-209ENST00000520953 IL27Q8NEV9 243 aa17.63■□□□□ 0.41
SREK1-209ENST00000520953 ZNF526Q8TF50 670 aaPredicted RBP17.63■□□□□ 0.41
SREK1-209ENST00000520953 NUP133Q8WUM0 1156 aa17.63■□□□□ 0.41
SREK1-209ENST00000520953 FAM217BQ9NTX9 383 aaPredicted RBP17.63■□□□□ 0.41
SREK1-209ENST00000520953 SLC12A7Q9Y666 1083 aa17.63■□□□□ 0.41
SREK1-209ENST00000520953 SSC5DA1L4H1 1573 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 WDR90Q96KV7 1748 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 ADD1P35611 737 aaKnown RBP17.62■□□□□ 0.41
SREK1-209ENST00000520953 CMTR1Q8N1G2 835 aaKnown RBP17.62■□□□□ 0.41
SREK1-209ENST00000520953 TCP11L1Q9NUJ3 509 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 PLIN4Q96Q06 1357 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 ZBTB43O43298 467 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 GH2P01242 217 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 PKP1Q13835 747 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 SEPT2Q15019 361 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 CCDC84Q86UT8 332 aaPredicted RBP17.62■□□□□ 0.41
SREK1-209ENST00000520953 TMEM47Q9BQJ4 181 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 MTA3Q9BTC8 594 aa17.62■□□□□ 0.41
SREK1-209ENST00000520953 HERC5Q9UII4 1024 aaKnown RBP17.62■□□□□ 0.41
SREK1-209ENST00000520953 SCN4AP35499 1836 aa17.61■□□□□ 0.41
SREK1-209ENST00000520953 METAP2P50579 478 aaKnown RBP eCLIP17.61■□□□□ 0.41
SREK1-209ENST00000520953 LRRC47Q8N1G4 583 aaKnown RBP17.61■□□□□ 0.41
SREK1-209ENST00000520953 MTMR4Q9NYA4 1195 aa17.61■□□□□ 0.41
SREK1-209ENST00000520953 GOLGA8AA7E2F4 631 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 TROAPQ12815 778 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 ABCB5Q2M3G0 1257 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 USP50Q70EL3 339 aaPredicted RBP17.6■□□□□ 0.41
SREK1-209ENST00000520953 SIAH1Q8IUQ4 282 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 RRAGCQ9HB90 399 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 PHF20L1A8MW92 1017 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 UBE2Q2LH0YL09 131 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 ATP2B2Q01814 1243 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 MAP3K10Q02779 954 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 PRKG1Q13976 671 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 GSE1Q14687 1217 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 RAB3GAP1Q15042 981 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 DGKHQ86XP1 1220 aa17.6■□□□□ 0.41
SREK1-209ENST00000520953 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
SREK1-209ENST00000520953 INTS4Q96HW7 963 aaKnown RBP17.6■□□□□ 0.41
SREK1-209ENST00000520953 TBC1D12O60347 775 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 PNMA1Q8ND90 353 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 ANKS1AQ92625 1134 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 DCPSQ96C86 337 aaKnown RBP17.59■□□□□ 0.41
SREK1-209ENST00000520953 GJB2P29033 226 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 NOVP48745 357 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 KRT26Q7Z3Y9 468 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 USP48Q86UV5 1035 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 GLIS2Q9BZE0 524 aaPredicted RBP17.59■□□□□ 0.41
SREK1-209ENST00000520953 KAT14Q9H8E8 782 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 NMRK2Q9NPI5 230 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 CLIP2Q9UDT6 1046 aa17.59■□□□□ 0.41
SREK1-209ENST00000520953 PITPNM2Q9BZ72 1349 aa17.58■□□□□ 0.41
SREK1-209ENST00000520953 IQCA1LA6NCM1 817 aa17.58■□□□□ 0.4
SREK1-209ENST00000520953 INPP5BP32019 993 aa17.58■□□□□ 0.4
SREK1-209ENST00000520953 FMR1Q06787 632 aaKnown RBP eCLIP17.58■□□□□ 0.47e-11■■■■■ 47.5
SREK1-209ENST00000520953 CATIPQ7Z7H3 387 aa17.58■□□□□ 0.4
SREK1-209ENST00000520953 TMTC2Q8N394 836 aa17.58■□□□□ 0.4
SREK1-209ENST00000520953 CCDC82Q8N4S0 544 aa17.58■□□□□ 0.4
SREK1-209ENST00000520953 PHKBQ93100 1093 aa17.58■□□□□ 0.4
SREK1-209ENST00000520953 CCDC17Q96LX7 622 aa17.58■□□□□ 0.4
SREK1-209ENST00000520953 SMC3Q9UQE7 1217 aa17.58■□□□□ 0.4
SREK1-209ENST00000520953 PTPDC1A2A3K4 754 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 PLEKHA8P1O95397 391 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 EEF2P13639 858 aaKnown RBP17.57■□□□□ 0.4
SREK1-209ENST00000520953 SULF1Q8IWU6 871 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 FANCBQ8NB91 859 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 ZBTB21Q9ULJ3 1066 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 MYH4Q9Y623 1939 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 NTRK3Q16288 839 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 RTN1Q16799 776 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 SYNE3Q6ZMZ3 975 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 STAG2Q8N3U4 1231 aa17.57■□□□□ 0.4
SREK1-209ENST00000520953 CIZ1Q9ULV3 898 aaPredicted RBP17.57■□□□□ 0.4
SREK1-209ENST00000520953 BAZ2BQ9UIF8 2168 aaKnown RBP17.56■□□□□ 0.4
SREK1-209ENST00000520953 A0A1W2PRG0 241 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 GOLGA8HP0CJ92 632 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 FDPSP14324 419 aaKnown RBP17.56■□□□□ 0.4
SREK1-209ENST00000520953 CAP2P40123 477 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 FOSBP53539 338 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 MAP1SQ66K74 1059 aaPredicted RBP17.56■□□□□ 0.4
SREK1-209ENST00000520953 TMEM179Q6ZVK1 233 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 SMARCC2Q8TAQ2 1214 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 CPVLQ9H3G5 476 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 TAOK2Q9UL54 1235 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.56■□□□□ 0.4
SREK1-209ENST00000520953 ATAD5Q96QE3 1844 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 TTLL1O95922 423 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 TOP1P11387 765 aaKnown RBP17.56■□□□□ 0.4
SREK1-209ENST00000520953 MCM4P33991 863 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 ICA1Q05084 483 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 NBPF11Q86T75 865 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 ACER1Q8TDN7 264 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 ZKSCAN4Q969J2 545 aaPredicted RBP17.56■□□□□ 0.4
SREK1-209ENST00000520953 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
SREK1-209ENST00000520953 NID2Q14112 1375 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 DCAF8L1A6NGE4 600 aa17.55■□□□□ 0.4
SREK1-209ENST00000520953 USP17L5A8MUK1 530 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms