RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 INHAP05111 366 aa12.94□□□□□ -0.34
PVT1-209ENST00000520913 ELNP15502 786 aa12.94□□□□□ -0.34
PVT1-209ENST00000520913 SHISA4Q96DD7 197 aa12.94□□□□□ -0.34
PVT1-209ENST00000520913 EMILIN3Q9NT22 766 aa12.94□□□□□ -0.34
PVT1-209ENST00000520913 MPHOSPH10O00566 681 aaKnown RBP12.93□□□□□ -0.34
PVT1-209ENST00000520913 GJB1P08034 283 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 VCAM1P19320 739 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 GJA8P48165 433 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 ERVK-9P63128 1117 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 ERVK-24P63145 666 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 SLFNL1Q499Z3 407 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 SOCS4Q8WXH5 440 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 P2RX7Q99572 595 aaKnown RBP12.93□□□□□ -0.34
PVT1-209ENST00000520913 PAGR1Q9BTK6 254 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 RNF208Q9H0X6 261 aa12.93□□□□□ -0.34
PVT1-209ENST00000520913 TTC41PQ6P2S7 1318 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L15C9J2P7 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L13C9JLJ4 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L11C9JVI0 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L18D6R9N7 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L22D6RA61 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L17D6RBQ6 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L19D6RCP7 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L20D6RJB6 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 PRKAB2O43741 272 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 HMGCRP04035 888 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 CYP2D6P10635 497 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 MAPK4P31152 587 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 GUCY1A2P33402 732 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 EVX2Q03828 476 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 USP17L24Q0WX57 530 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 SEPT2Q15019 361 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 TMEM179Q6ZVK1 233 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 KBTBD3Q8NAB2 608 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 SLC44A5Q8NCS7 719 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 GPRC5AQ8NFJ5 357 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 ACER1Q8TDN7 264 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 UNC93B1Q9H1C4 597 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 ARPP21Q9UBL0 812 aaPredicted RBP12.92□□□□□ -0.34
PVT1-209ENST00000520913 SLC4A4Q9Y6R1 1079 aa12.92□□□□□ -0.34
PVT1-209ENST00000520913 CHGBP05060 677 aa12.91□□□□□ -0.34
PVT1-209ENST00000520913 CAPN2P17655 700 aa12.91□□□□□ -0.34
PVT1-209ENST00000520913 TSHZ3Q63HK5 1081 aa12.91□□□□□ -0.34
PVT1-209ENST00000520913 CCAR1Q8IX12 1150 aaKnown RBP12.91□□□□□ -0.34
PVT1-209ENST00000520913 GCC1Q96CN9 775 aa12.91□□□□□ -0.34
PVT1-209ENST00000520913 PUS7LQ9H0K6 701 aaKnown RBP12.91□□□□□ -0.34
PVT1-209ENST00000520913 SH2D4AQ9H788 454 aa12.91□□□□□ -0.34
PVT1-209ENST00000520913 TXNRD2Q9NNW7 524 aa12.91□□□□□ -0.34
PVT1-209ENST00000520913 PCDHB15Q9Y5E8 787 aa12.91□□□□□ -0.34
PVT1-209ENST00000520913 ROBO3Q96MS0 1386 aa12.91□□□□□ -0.34
PVT1-209ENST00000520913 ERC2O15083 957 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 ZFYP08048 801 aaPredicted RBP12.9□□□□□ -0.34
PVT1-209ENST00000520913 ICA1Q05084 483 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 LRRFIP1Q32MZ4 808 aaKnown RBP12.9□□□□□ -0.34
PVT1-209ENST00000520913 C12orf60Q5U649 245 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 LBX2Q6XYB7 198 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 CATSPERGQ6ZRH7 1159 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 C16orf86Q6ZW13 317 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 U2AF1L4Q8WU68 220 aaKnown RBP12.9□□□□□ -0.34
PVT1-209ENST00000520913 APPBP2Q92624 585 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 DYNLL2Q96FJ2 89 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 CCDC17Q96LX7 622 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 NUDT12Q9BQG2 462 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 RPAP3Q9H6T3 665 aaPredicted RBP12.9□□□□□ -0.34
PVT1-209ENST00000520913 ARHGEF10LQ9HCE6 1279 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 CWC22Q9HCG8 908 aaKnown RBP12.9□□□□□ -0.34
PVT1-209ENST00000520913 PAK6Q9NQU5 681 aaPredicted RBP12.9□□□□□ -0.34
PVT1-209ENST00000520913 RBPJLQ9UBG7 517 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 RABGAP1Q9Y3P9 1069 aa12.9□□□□□ -0.34
PVT1-209ENST00000520913 CEP290O15078 2479 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 CYP2D7A0A087X1C5 515 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 USP17L12C9JPN9 530 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 USP17L21D6R901 530 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 PEX10O60683 326 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 SLC34A2O95436 690 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 AKR1B1P15121 316 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 CCNA1P78396 465 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.89□□□□□ -0.35
PVT1-209ENST00000520913 PORCNQ9H237 461 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 GJD2Q9UKL4 321 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 LAMA4Q16363 1823 aa12.89□□□□□ -0.35
PVT1-209ENST00000520913 DNAH12Q6ZR08 3092 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 SPDYE16A6NNV3 312 aaPredicted RBP12.88□□□□□ -0.35
PVT1-209ENST00000520913 RNF113AO15541 343 aaKnown RBP12.88□□□□□ -0.35
PVT1-209ENST00000520913 CNMDO75829 334 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 GLRX3O76003 335 aaKnown RBP12.88□□□□□ -0.35
PVT1-209ENST00000520913 FARP2O94887 1054 aaPredicted RBP12.88□□□□□ -0.35
PVT1-209ENST00000520913 SGPL1O95470 568 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 CDK8P49336 464 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 GIMAP6Q6P9H5 292 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 CTR9Q6PD62 1173 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 GPR142Q7Z601 462 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 PLEKHH3Q7Z736 793 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 UBE2Q1Q7Z7E8 422 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 TRMT44Q8IYL2 757 aaKnown RBP12.88□□□□□ -0.35
PVT1-209ENST00000520913 PI4K2BQ8TCG2 481 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 TRIB2Q92519 343 aa12.88□□□□□ -0.35
PVT1-209ENST00000520913 LPAR1Q92633 364 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms