RNA–Protein interactions for RNA: ENST00000520709.5

TMEM55A-205, humanhuman

TSL 3

Gene TMEM55A, Length 649 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-205ENST00000520709 ERC1Q8IUD2 1116 aa16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 GDF15Q99988 308 aa16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 KIAA1683Q9H0B3 1180 aa16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 PLXNA1Q9UIW2 1896 aa16.48■□□□□ 0.23
TMEM55A-205ENST00000520709 PFASO15067 1338 aa16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 ZBED9Q6R2W3 1325 aa16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 GUCY1A2P33402 732 aa16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 MAP3K12Q12852 859 aa16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 LBX2Q6XYB7 198 aa16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 TRMT44Q8IYL2 757 aaKnown RBP16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 APBA2Q99767 749 aa16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 NBPF3Q9H094 633 aa16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 RABGAP1Q9Y3P9 1069 aa16.47■□□□□ 0.23
TMEM55A-205ENST00000520709 SOX1O00570 391 aaPredicted RBP16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 ZKSCAN1P17029 563 aaPredicted RBP16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 VCAM1P19320 739 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 RGS2P41220 211 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 PLCD1P51178 756 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 CACNB2Q08289 660 aaPredicted RBP16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 PDE3AQ14432 1141 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 CCL14Q16627 93 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 PLEKHH3Q7Z736 793 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 TTC6Q86TZ1 520 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 ACER1Q8TDN7 264 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 PANK1Q8TE04 598 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 PAGR1Q9BTK6 254 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 C11orf49Q9H6J7 331 aa16.46■□□□□ 0.23
TMEM55A-205ENST00000520709 USP17L15C9J2P7 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP17L13C9JLJ4 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP17L11C9JVI0 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP17L18D6R9N7 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP17L22D6RA61 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP17L17D6RBQ6 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP17L19D6RCP7 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP17L20D6RJB6 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 COL6A1P12109 1028 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 BMP8BP34820 402 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP14P54578 494 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 USP17L24Q0WX57 530 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 ZYXQ15942 572 aaKnown RBP16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 ABCB5Q2M3G0 1257 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 CERKLQ49MI3 558 aaPredicted RBP16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 LHX8Q68G74 356 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 CATSPERGQ6ZRH7 1159 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 C7orf61Q8IZ16 206 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 RHPN1Q8TCX5 695 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 FEZ1Q99689 392 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 STAP2Q9UGK3 403 aa16.45■□□□□ 0.22
TMEM55A-205ENST00000520709 TCRBV5S4A2TA0A5A2 114 aa16.44■□□□□ 0.22
TMEM55A-205ENST00000520709 SPDYE16A6NNV3 312 aaPredicted RBP16.44■□□□□ 0.22
TMEM55A-205ENST00000520709 PDE6AP16499 860 aa16.44■□□□□ 0.22
TMEM55A-205ENST00000520709 CCND3P30281 292 aaPredicted RBP16.44■□□□□ 0.22
TMEM55A-205ENST00000520709 EVX2Q03828 476 aa16.44■□□□□ 0.22
TMEM55A-205ENST00000520709 MAP2K5Q13163 448 aa16.44■□□□□ 0.22
TMEM55A-205ENST00000520709 IL1RAPL2Q9NP60 686 aa16.44■□□□□ 0.22
TMEM55A-205ENST00000520709 MAGEB6P1A0A0J9YX57 407 aa16.43■□□□□ 0.22
TMEM55A-205ENST00000520709 IGHA2P01877 340 aa16.43■□□□□ 0.22
TMEM55A-205ENST00000520709 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
TMEM55A-205ENST00000520709 TTF1Q15361 905 aaPredicted RBP16.43■□□□□ 0.22
TMEM55A-205ENST00000520709 HSP90AB4PQ58FF6 505 aa16.43■□□□□ 0.22
TMEM55A-205ENST00000520709 MIER1Q8N108 512 aa16.43■□□□□ 0.22
TMEM55A-205ENST00000520709 BTBD7Q9P203 1132 aa16.43■□□□□ 0.22
TMEM55A-205ENST00000520709 ZMYND8Q9ULU4 1186 aaPredicted RBP16.43■□□□□ 0.22
TMEM55A-205ENST00000520709 HOXC6P09630 235 aa16.42■□□□□ 0.22
TMEM55A-205ENST00000520709 GRB14Q14449 540 aa16.42■□□□□ 0.22
TMEM55A-205ENST00000520709 SIRT2Q8IXJ6 389 aa16.42■□□□□ 0.22
TMEM55A-205ENST00000520709 LRCH3Q96II8 777 aa16.42■□□□□ 0.22
TMEM55A-205ENST00000520709 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
TMEM55A-205ENST00000520709 MYH4Q9Y623 1939 aa16.42■□□□□ 0.22
TMEM55A-205ENST00000520709 ZNF532Q9HCE3 1301 aa16.42■□□□□ 0.22
TMEM55A-205ENST00000520709 A0A1W2PRG0 241 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 SLC15A5A6NIM6 579 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 PTPREP23469 700 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 CCNA1P78396 465 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 SEPT2Q15019 361 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 SLC9C2Q5TAH2 1124 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 LCORLQ8N3X6 602 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 KIF1BPQ96EK5 621 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 RPAP3Q9H6T3 665 aaPredicted RBP16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 CABP5Q9NP86 173 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 DCP1AQ9NPI6 582 aaPredicted RBP16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 SMCHD1A6NHR9 2005 aa16.41■□□□□ 0.22
TMEM55A-205ENST00000520709 LAMA2P24043 3122 aaKnown RBP16.4■□□□□ 0.22
TMEM55A-205ENST00000520709 CCAR1Q8IX12 1150 aaKnown RBP16.4■□□□□ 0.22
TMEM55A-205ENST00000520709 CLASRPQ8N2M8 674 aaKnown RBP16.4■□□□□ 0.22
TMEM55A-205ENST00000520709 SDR42E1Q8WUS8 393 aa16.4■□□□□ 0.22
TMEM55A-205ENST00000520709 GOLIM4O00461 696 aa16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 GLRX3O76003 335 aaKnown RBP16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 POLR3DP05423 398 aaPredicted RBP16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 SYN1P17600 705 aa16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 MAGEA10P43363 369 aaPredicted RBP16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 LRRC26Q2I0M4 334 aa16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 RPAP2Q8IXW5 612 aaPredicted RBP16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 SLC44A5Q8NCS7 719 aa16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 NPLOC4Q8TAT6 608 aa16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 EDC3Q96F86 508 aaKnown RBP16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 ZBTB40Q9NUA8 1239 aa16.39■□□□□ 0.21
TMEM55A-205ENST00000520709 MCM9Q9NXL9 1143 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms