RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 KLRK1P26718 216 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 GNAQP50148 359 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 TPRNQ4KMQ1 711 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 OTUD7BQ6GQQ9 843 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 DPY19L2Q6NUT2 758 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 SP8Q8IXZ3 490 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 CKAP2LQ8IYA6 745 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
SPARC-202ENST00000520687 BPIFA3Q9BQP9 254 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 BRMS1Q9HCU9 246 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 INCENPQ9NQS7 918 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 TCP11L1Q9NUJ3 509 aa11.47□□□□□ -0.57
SPARC-202ENST00000520687 WTIPA6NIX2 430 aaPredicted RBP11.46□□□□□ -0.57
SPARC-202ENST00000520687 KIF28PB7ZC32 967 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 GOLGA6L19H0YKK7 550 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 TPM2P07951 284 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 LMNB1P20700 586 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 PRDX5P30044 214 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 KIAA2012Q0VF49 1180 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 DHX8Q14562 1220 aaKnown RBP11.46□□□□□ -0.57
SPARC-202ENST00000520687 AXDND1Q5T1B0 1012 aaPredicted RBP11.46□□□□□ -0.57
SPARC-202ENST00000520687 C12orf60Q5U649 245 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 SMIM5Q71RC9 77 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 RAB11FIP4Q86YS3 637 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 CEP57L1Q8IYX8 460 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 CTCFLQ8NI51 663 aaPredicted RBP11.46□□□□□ -0.57
SPARC-202ENST00000520687 CCDC34Q96HJ3 373 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 MCOLN1Q9GZU1 580 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 GOLPH3LQ9H4A5 285 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 CBX8Q9HC52 389 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 CD209Q9NNX6 404 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 AATFQ9NY61 560 aaKnown RBP eCLIP11.46□□□□□ -0.57
SPARC-202ENST00000520687 ROBO3Q96MS0 1386 aa11.46□□□□□ -0.57
SPARC-202ENST00000520687 POLRMTO00411 1230 aaKnown RBP11.45□□□□□ -0.58
SPARC-202ENST00000520687 UFL1O94874 794 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 RXRAP19793 462 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 CDC25BP30305 580 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 USP5P45974 858 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 TERF1P54274 439 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 GPSM2P81274 684 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 TROAPQ12815 778 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 PTPAQ15257 358 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 SARM1Q6SZW1 724 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.45□□□□□ -0.58
SPARC-202ENST00000520687 CCDC144CPQ8IYA2 1237 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 DIS3L2Q8IYB7 885 aaKnown RBP11.45□□□□□ -0.58
SPARC-202ENST00000520687 KRI1Q8N9T8 703 aaKnown RBP11.45□□□□□ -0.58
SPARC-202ENST00000520687 NKX2-3Q8TAU0 364 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 NUP133Q8WUM0 1156 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 LZTS2Q9BRK4 669 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 MYL10Q9BUA6 226 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 KIAA1468Q9P260 1216 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 TAOK2Q9UL54 1235 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 MYH15Q9Y2K3 1946 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 MROH7-TTC4A0A0A0MT08 1334 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 FAM205AQ6ZU69 1335 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 PASKQ96RG2 1323 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 GPR75-ASB3A0A0A6YYF3 556 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 MYO1BO43795 1136 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
SPARC-202ENST00000520687 ZNF202O95125 648 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 KCNA3P22001 575 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 ALDH1B1P30837 517 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 TPM4P67936 248 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 FUT2Q10981 343 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 KANK3Q6NY19 840 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 TMTC3Q6ZXV5 915 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 TXNRD3Q86VQ6 643 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 ZKSCAN3Q9BRR0 538 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 FTOQ9C0B1 505 aaKnown RBP eCLIP11.45□□□□□ -0.58
SPARC-202ENST00000520687 TMX4Q9H1E5 349 aaPredicted RBP11.45□□□□□ -0.58
SPARC-202ENST00000520687 SH3GLB2Q9NR46 395 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 MCM9Q9NXL9 1143 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 HPSEQ9Y251 543 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 LRRC37AA6NMS7 1700 aa11.45□□□□□ -0.58
SPARC-202ENST00000520687 CCDC88AQ3V6T2 1871 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 RASSF10A6NK89 507 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 TSPY2A6NKD2 308 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 POTECB2RU33 542 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 OFD1O75665 1012 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 NPR1P16066 1061 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 PDE6BP35913 854 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 SYKP43405 635 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 TRAPPC10P48553 1259 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 NDUFA8P51970 172 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 DEFB115Q30KQ5 88 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 RESP18Q5W5W9 173 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 CCDC24Q8N4L8 307 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 AIFM3Q96NN9 605 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 COA1Q9GZY4 146 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 FAM13BQ9NYF5 915 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 ATP6V0A2Q9Y487 856 aa11.44□□□□□ -0.58
SPARC-202ENST00000520687 ANKRD31Q8N7Z5 1873 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 A0A1B0GVL5 298 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 SMTNL1A8MU46 457 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 BECN2A8MW95 431 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 PPFIA3O75145 1194 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 PFKFB1P16118 471 aa11.43□□□□□ -0.58
SPARC-202ENST00000520687 CALML3P27482 149 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms