RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 H3BQV1 296 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 SSRP1Q08945 709 aaKnown RBP18.67■□□□□ 0.58
SNHG6-201ENST00000520348 GRM4Q14833 912 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 SKOR2Q2VWA4 1001 aaPredicted RBP18.67■□□□□ 0.58
SNHG6-201ENST00000520348 IFFO2Q5TF58 517 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 ILDR2Q71H61 639 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 FAM83AQ86UY5 434 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 NUP133Q8WUM0 1156 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 FAM151AQ8WW52 585 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 PHKBQ93100 1093 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 C8orf76Q96K31 380 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 TMEM47Q9BQJ4 181 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 KAT14Q9H8E8 782 aa18.67■□□□□ 0.58
SNHG6-201ENST00000520348 TRAK2O60296 914 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 DEXIO95424 95 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 TOP1P11387 765 aaKnown RBP18.66■□□□□ 0.58
SNHG6-201ENST00000520348 AKR1B1P15121 316 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 PNMA1Q8ND90 353 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 WASF1Q92558 559 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 CEP95Q96GE4 821 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 ALG1Q9BT22 464 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 TMOD2Q9NZR1 351 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 CNTNAP5Q8WYK1 1306 aa18.66■□□□□ 0.58
SNHG6-201ENST00000520348 SBF1O95248 1867 aa18.65■□□□□ 0.58
SNHG6-201ENST00000520348 PRPF3O43395 683 aaKnown RBP18.65■□□□□ 0.58
SNHG6-201ENST00000520348 KIF5BP33176 963 aa18.65■□□□□ 0.58
SNHG6-201ENST00000520348 EIF6P56537 245 aaKnown RBP18.65■□□□□ 0.58
SNHG6-201ENST00000520348 PPP4R3BQ5MIZ7 849 aa18.65■□□□□ 0.58
SNHG6-201ENST00000520348 TRIM22Q8IYM9 498 aa18.65■□□□□ 0.58
SNHG6-201ENST00000520348 CTCFLQ8NI51 663 aaPredicted RBP18.65■□□□□ 0.58
SNHG6-201ENST00000520348 MYOZ2Q9NPC6 264 aa18.65■□□□□ 0.58
SNHG6-201ENST00000520348 MTMR4Q9NYA4 1195 aa18.65■□□□□ 0.58
SNHG6-201ENST00000520348 PGAP2Q9UHJ9 254 aa18.65■□□□□ 0.58
SNHG6-201ENST00000520348 PLEKHA8P1O95397 391 aa18.64■□□□□ 0.57
SNHG6-201ENST00000520348 DNM1Q05193 864 aaKnown RBP18.64■□□□□ 0.57
SNHG6-201ENST00000520348 TCP10Q12799 353 aa18.64■□□□□ 0.57
SNHG6-201ENST00000520348 KLHL40Q2TBA0 621 aa18.64■□□□□ 0.57
SNHG6-201ENST00000520348 ATL3Q6DD88 541 aa18.64■□□□□ 0.57
SNHG6-201ENST00000520348 FERMT3Q86UX7 667 aa18.64■□□□□ 0.57
SNHG6-201ENST00000520348 SLC26A6Q9BXS9 759 aa18.64■□□□□ 0.57
SNHG6-201ENST00000520348 ELP1O95163 1332 aa18.64■□□□□ 0.57
SNHG6-201ENST00000520348 ZNF541Q9H0D2 1346 aa18.64■□□□□ 0.57
SNHG6-201ENST00000520348 TCHHQ07283 1943 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 PALM3A6NDB9 673 aaPredicted RBP18.63■□□□□ 0.57
SNHG6-201ENST00000520348 WNT10BO00744 389 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 PPFIA3O75145 1194 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 SNHG28P0DPA3 235 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 LMNB1P20700 586 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 GNAQP50148 359 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 KIF23Q02241 960 aaPredicted RBP18.63■□□□□ 0.57
SNHG6-201ENST00000520348 PKN1Q16512 942 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 AIFM3Q96NN9 605 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 SYT17Q9BSW7 474 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 HERC5Q9UII4 1024 aaKnown RBP18.63■□□□□ 0.57
SNHG6-201ENST00000520348 CNPY2Q9Y2B0 182 aa18.63■□□□□ 0.57
SNHG6-201ENST00000520348 SMARCA1P28370 1054 aa18.62■□□□□ 0.57
SNHG6-201ENST00000520348 GUCY1A2P33402 732 aa18.62■□□□□ 0.57
SNHG6-201ENST00000520348 GMPSP49915 693 aaPredicted RBP18.62■□□□□ 0.57
SNHG6-201ENST00000520348 KRT85P78386 507 aa18.62■□□□□ 0.57
SNHG6-201ENST00000520348 MAP3K10Q02779 954 aa18.62■□□□□ 0.57
SNHG6-201ENST00000520348 KRT40Q6A162 431 aa18.62■□□□□ 0.57
SNHG6-201ENST00000520348 BRAPQ7Z569 592 aa18.62■□□□□ 0.57
SNHG6-201ENST00000520348 SRBD1Q8N5C6 995 aaKnown RBP18.62■□□□□ 0.57
SNHG6-201ENST00000520348 RBM27Q9P2N5 1060 aaKnown RBP18.62■□□□□ 0.57
SNHG6-201ENST00000520348 MAD2L2Q9UI95 211 aa18.62■□□□□ 0.57
SNHG6-201ENST00000520348 STX8Q9UNK0 236 aa18.62■□□□□ 0.57
SNHG6-201ENST00000520348 MYH6P13533 1939 aa18.61■□□□□ 0.57
SNHG6-201ENST00000520348 SHTN1A0MZ66 631 aa18.61■□□□□ 0.57
SNHG6-201ENST00000520348 CLRN2A0PK11 232 aa18.61■□□□□ 0.57
SNHG6-201ENST00000520348 TBC1D12O60347 775 aa18.61■□□□□ 0.57
SNHG6-201ENST00000520348 PRPF40AO75400 957 aaKnown RBP18.61■□□□□ 0.57
SNHG6-201ENST00000520348 CSPP1Q1MSJ5 1256 aa18.61■□□□□ 0.57
SNHG6-201ENST00000520348 LZTS2Q9BRK4 669 aa18.61■□□□□ 0.57
SNHG6-201ENST00000520348 UBE2Q2LH0YL09 131 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 MYO1BO43795 1136 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 TTLL1O95922 423 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 MBD3O95983 291 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 U2AF2P26368 475 aaKnown RBP eCLIP18.6■□□□□ 0.57
SNHG6-201ENST00000520348 GUCY1B3Q02153 619 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 SLC35G1Q2M3R5 365 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 OTUD7BQ6GQQ9 843 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 FAM173BQ6P4H8 233 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 USP48Q86UV5 1035 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 MKL1Q969V6 931 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 GJB4Q9NTQ9 266 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 NYAP2Q9P242 653 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 SYNPO2Q9UMS6 1093 aa18.6■□□□□ 0.57
SNHG6-201ENST00000520348 TCP10L2B9ZVM9 353 aa18.59■□□□□ 0.57
SNHG6-201ENST00000520348 NBPF9Q3BBW0 867 aa18.59■□□□□ 0.57
SNHG6-201ENST00000520348 CERKLQ49MI3 558 aaPredicted RBP18.59■□□□□ 0.57
SNHG6-201ENST00000520348 TMEM179Q6ZVK1 233 aa18.59■□□□□ 0.57
SNHG6-201ENST00000520348 ZSCAN29Q8IWY8 852 aaPredicted RBP18.59■□□□□ 0.57
SNHG6-201ENST00000520348 MICALL2Q8IY33 904 aa18.59■□□□□ 0.57
SNHG6-201ENST00000520348 FAM177A1Q8N128 213 aaPredicted RBP18.59■□□□□ 0.57
SNHG6-201ENST00000520348 CMTR1Q8N1G2 835 aaKnown RBP18.59■□□□□ 0.57
SNHG6-201ENST00000520348 SHISA4Q96DD7 197 aa18.59■□□□□ 0.57
SNHG6-201ENST00000520348 CSRNP1Q96S65 589 aa18.59■□□□□ 0.57
SNHG6-201ENST00000520348 SPZ1Q9BXG8 430 aa18.59■□□□□ 0.57
SNHG6-201ENST00000520348 SCAND2PQ9GZW5 306 aaPredicted RBP18.59■□□□□ 0.57
SNHG6-201ENST00000520348 KIF28PB7ZC32 967 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms