RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 PRMT6Q96LA8 375 aaPredicted RBP12.37□□□□□ -0.43
BRD9-216ENST00000518251 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 VEZTQ9HBM0 779 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 TACC3Q9Y6A5 838 aa12.37□□□□□ -0.43
BRD9-216ENST00000518251 MYO1BO43795 1136 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 KDM4AO75164 1064 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 WDHD1O75717 1129 aaPredicted RBP12.36□□□□□ -0.43
BRD9-216ENST00000518251 IREB2P48200 963 aaKnown RBP12.36□□□□□ -0.43
BRD9-216ENST00000518251 PICALMQ13492 652 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 RASA3Q14644 834 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 RRP12Q5JTH9 1297 aaKnown RBP12.36□□□□□ -0.43
BRD9-216ENST00000518251 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 ANKRD13AQ8IZ07 590 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 STK11IPQ8N1F8 1099 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 FBXL16Q8N461 479 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 ESR2Q92731 530 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 OPTNQ96CV9 577 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 INTS4Q96HW7 963 aaKnown RBP12.36□□□□□ -0.43
BRD9-216ENST00000518251 TMEM87BQ96K49 555 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 LARP6Q9BRS8 491 aaKnown RBP12.36□□□□□ -0.43
BRD9-216ENST00000518251 EFCC1Q9HA90 598 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 SAP30BPQ9UHR5 308 aaKnown RBP12.36□□□□□ -0.43
BRD9-216ENST00000518251 TPCN1Q9ULQ1 816 aa12.36□□□□□ -0.43
BRD9-216ENST00000518251 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
BRD9-216ENST00000518251 ZSWIM8A7E2V4 1837 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 SMIM22K7EJ46 135 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 SH2B2O14492 632 aaPredicted RBP12.35□□□□□ -0.43
BRD9-216ENST00000518251 ORC4O43929 436 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 USP2O75604 605 aaPredicted RBP12.35□□□□□ -0.43
BRD9-216ENST00000518251 FGRP09769 529 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 NT5C2P49902 561 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 SP3Q02447 781 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 PDE4BQ07343 736 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 ME3Q16798 604 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 SLC4A8Q2Y0W8 1093 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 SUPT20HL1Q3ZLR7 823 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 SPDYE2Q495Y8 402 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 MS4A4AQ96JQ5 239 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 TEPSINQ96N21 525 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 MTA3Q9BTC8 594 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 OSBPL5Q9H0X9 879 aaPredicted RBP12.35□□□□□ -0.43
BRD9-216ENST00000518251 ELP3Q9H9T3 547 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 INCENPQ9NQS7 918 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 PTCH2Q9Y6C5 1203 aa12.35□□□□□ -0.43
BRD9-216ENST00000518251 EVX2Q03828 476 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 APOBRQ0VD83 1088 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 VGLL4Q14135 290 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 SART3Q15020 963 aaKnown RBP12.34□□□□□ -0.43
BRD9-216ENST00000518251 OTUD7BQ6GQQ9 843 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 TTC6Q86TZ1 520 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 CCDC83Q8IWF9 413 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 BRI3BPQ8WY22 251 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 IDI2Q9BXS1 227 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 CWC22Q9HCG8 908 aaKnown RBP12.34□□□□□ -0.43
BRD9-216ENST00000518251 DDX4Q9NQI0 724 aaKnown RBP12.34□□□□□ -0.43
BRD9-216ENST00000518251 TMOD2Q9NZR1 351 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 ZSWIM5Q9P217 1185 aa12.34□□□□□ -0.43
BRD9-216ENST00000518251 CIZ1Q9ULV3 898 aaPredicted RBP12.34□□□□□ -0.43
BRD9-216ENST00000518251 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.34□□□□□ -0.43
BRD9-216ENST00000518251 COL2A1P02458 1487 aaPredicted RBP12.34□□□□□ -0.43
BRD9-216ENST00000518251 ERICH2A1L162 156 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
BRD9-216ENST00000518251 RANBP6O60518 1105 aaKnown RBP12.33□□□□□ -0.44
BRD9-216ENST00000518251 NPM3O75607 178 aaKnown RBP12.33□□□□□ -0.44
BRD9-216ENST00000518251 PRDM1O75626 825 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 DDIT3P35638 169 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 ST3GAL1Q11201 340 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 TNFAIP1Q13829 316 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 TMEM67Q5HYA8 995 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.33□□□□□ -0.44
BRD9-216ENST00000518251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.33□□□□□ -0.44
BRD9-216ENST00000518251 GTF3C6Q969F1 213 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 UBAC1Q9BSL1 405 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 TDRD3Q9H7E2 651 aaKnown RBP12.33□□□□□ -0.44
BRD9-216ENST00000518251 ZNF287Q9HBT7 754 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
BRD9-216ENST00000518251 SIPA1L1O43166 1804 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 KLF18A0A0U1RQI7 1052 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 ENTPD3O75355 529 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 HLA-DOAP06340 250 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 LIFRP42702 1097 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 PLCD1P51178 756 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 CACNB3P54284 484 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 EVCP57679 992 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 NFIAQ12857 509 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 STK3Q13188 491 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 WTAPQ15007 396 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 SLC9C1Q4G0N8 1177 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 C16orf86Q6ZW13 317 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 FAM43AQ8N2R8 423 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 NECAB1Q8N987 351 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 DYNLL2Q96FJ2 89 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 ZNF274Q96GC6 653 aaPredicted RBP12.32□□□□□ -0.44
BRD9-216ENST00000518251 LY9Q9HBG7 655 aa12.32□□□□□ -0.44
BRD9-216ENST00000518251 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
BRD9-216ENST00000518251 ZNF70Q9UC06 446 aaPredicted RBP12.32□□□□□ -0.44
BRD9-216ENST00000518251 NAP1L2Q9ULW6 460 aaPredicted RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms