RNA–Protein interactions for RNA: ENST00000517824.5

SPIDR-204, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 849 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-204ENST00000517824 TSPY8P0CW00 308 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 CHRNA5P30532 468 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 ALDH1B1P30837 517 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 KRT2P35908 639 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 BTDP43251 543 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 KIAA2012Q0VF49 1180 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 SEC23AQ15436 765 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 NTRK3Q16288 839 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 DALRD3Q5D0E6 543 aaKnown RBP12.4□□□□□ -0.42
SPIDR-204ENST00000517824 RILPL1Q5EBL4 403 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 NOSTRINQ8IVI9 506 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 SP8Q8IXZ3 490 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 DIS3L2Q8IYB7 885 aaKnown RBP12.4□□□□□ -0.42
SPIDR-204ENST00000517824 ZNF444Q8N0Y2 327 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-204ENST00000517824 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 CRACR2BQ8N4Y2 399 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-204ENST00000517824 SH3RF3Q8TEJ3 882 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-204ENST00000517824 FUCA2Q9BTY2 467 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 FOXP1Q9H334 677 aaPredicted RBP12.4□□□□□ -0.42
SPIDR-204ENST00000517824 PODXL2Q9NZ53 605 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 PCDHA7Q9UN72 937 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.4□□□□□ -0.42
SPIDR-204ENST00000517824 MRVI1Q9Y6F6 885 aa12.4□□□□□ -0.42
SPIDR-204ENST00000517824 PSME4Q14997 1843 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 CUTAO60888 179 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 PPP6R2O75170 966 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 CAPN15O75808 1086 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 CYP2D6P10635 497 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 IL1R1P14778 569 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 GNAQP50148 359 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 DIXDC1Q155Q3 683 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 SLC4A8Q2Y0W8 1093 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 DPP8Q6V1X1 898 aaPredicted RBP12.39□□□□□ -0.43
SPIDR-204ENST00000517824 RBM43Q6ZSC3 357 aaKnown RBP12.39□□□□□ -0.43
SPIDR-204ENST00000517824 DRC7Q8IY82 874 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 TBC1D16Q8TBP0 767 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.39□□□□□ -0.43
SPIDR-204ENST00000517824 ZC3H12CQ9C0D7 883 aaKnown RBP12.39□□□□□ -0.43
SPIDR-204ENST00000517824 COA1Q9GZY4 146 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 GOLPH3LQ9H4A5 285 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 ARFGEF1Q9Y6D6 1849 aa12.39□□□□□ -0.43
SPIDR-204ENST00000517824 BAZ2BQ9UIF8 2168 aaKnown RBP12.39□□□□□ -0.43
SPIDR-204ENST00000517824 PRPF3O43395 683 aaKnown RBP12.38□□□□□ -0.43
SPIDR-204ENST00000517824 BMP15O95972 392 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 FGRP09769 529 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 USP17L8P0C7I0 530 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 U2AF2P26368 475 aaKnown RBP eCLIP12.38□□□□□ -0.43
SPIDR-204ENST00000517824 ZNF165P49910 485 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 SLC39A14Q15043 492 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 FAM47AQ5JRC9 791 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 TMTC3Q6ZXV5 915 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 MAPKAPK5Q8IW41 473 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 MPNDQ8N594 471 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 RBM46Q8TBY0 533 aaKnown RBP12.38□□□□□ -0.43
SPIDR-204ENST00000517824 ZNF384Q8TF68 577 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 TGFBRAP1Q8WUH2 860 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 RRAGDQ9NQL2 400 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-204ENST00000517824 GJB4Q9NTQ9 266 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 FAM217BQ9NTX9 383 aaPredicted RBP12.38□□□□□ -0.43
SPIDR-204ENST00000517824 SAP30BPQ9UHR5 308 aaKnown RBP12.38□□□□□ -0.43
SPIDR-204ENST00000517824 ATP6V0A2Q9Y487 856 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 TACC3Q9Y6A5 838 aa12.38□□□□□ -0.43
SPIDR-204ENST00000517824 A0A1B0GVL5 298 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 RIMBP2O15034 1052 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 PFKFB1P16118 471 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 CMA1P23946 247 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 MARCKSP29966 332 aaPredicted RBP12.37□□□□□ -0.43
SPIDR-204ENST00000517824 CLCN1P35523 988 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 SYKP43405 635 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 PPP4CP60510 307 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 TFAP4Q01664 338 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 C12orf60Q5U649 245 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 KRI1Q8N9T8 703 aaKnown RBP12.37□□□□□ -0.43
SPIDR-204ENST00000517824 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.432e-7■□□□□ 8.8
SPIDR-204ENST00000517824 MASTLQ96GX5 879 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 DNAJC25Q9H1X3 360 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 RNF181Q9P0P0 153 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 KCNJ14Q9UNX9 436 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 SUGT1Q9Y2Z0 365 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 SLX4Q8IY92 1834 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 FAM205AQ6ZU69 1335 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 CNTNAP5Q8WYK1 1306 aa12.37□□□□□ -0.43
SPIDR-204ENST00000517824 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-204ENST00000517824 CALML3P27482 149 aa12.36□□□□□ -0.43
SPIDR-204ENST00000517824 GTF2IP78347 998 aa12.36□□□□□ -0.43
SPIDR-204ENST00000517824 HTRA3P83110 453 aa12.36□□□□□ -0.43
SPIDR-204ENST00000517824 CMTR1Q8N1G2 835 aaKnown RBP12.36□□□□□ -0.43
SPIDR-204ENST00000517824 CCDC148Q8NFR7 591 aa12.36□□□□□ -0.43
SPIDR-204ENST00000517824 NKX2-3Q8TAU0 364 aa12.36□□□□□ -0.43
SPIDR-204ENST00000517824 RTFDC1Q9BY42 306 aaPredicted RBP12.36□□□□□ -0.43
SPIDR-204ENST00000517824 TRIM5Q9C035 493 aa12.36□□□□□ -0.43
SPIDR-204ENST00000517824 CBX8Q9HC52 389 aa12.36□□□□□ -0.43
SPIDR-204ENST00000517824 ZKSCAN5Q9Y2L8 839 aa12.36□□□□□ -0.43
SPIDR-204ENST00000517824 TRIM75PA6NK02 468 aa12.35□□□□□ -0.43
SPIDR-204ENST00000517824 BTBD18B2RXH4 712 aa12.35□□□□□ -0.43
SPIDR-204ENST00000517824 PLEKHA8P1O95397 391 aa12.35□□□□□ -0.43
SPIDR-204ENST00000517824 ATP2B1P20020 1258 aa12.35□□□□□ -0.43
SPIDR-204ENST00000517824 PRELPP51888 382 aa12.35□□□□□ -0.43
SPIDR-204ENST00000517824 NDUFA8P51970 172 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms