RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 CYP2U1Q7Z449 544 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 ZNF295-AS1Q8N0V1 137 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 NME8Q8N427 588 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 NBPF15Q8N660 670 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 TSPYL6Q8N831 410 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 NAP1L5Q96NT1 182 aaPredicted RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 STK31Q9BXU1 1019 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 NARFQ9UHQ1 456 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 NOP58Q9Y2X3 529 aaKnown RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 PARP3Q9Y6F1 533 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 SRCAPQ6ZRS2 3230 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 FANCIQ9NVI1 1328 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 ITGB4P16144 1822 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 FAM177BA6PVY3 158 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 CREB3O43889 395 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 HOXB7P09629 217 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 PAX3P23760 479 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 EIF1AXP47813 144 aaKnown RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 DSC3Q14574 896 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 PROSER3Q2NL68 480 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 COPS6Q7L5N1 327 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 XAGE3Q8WTP9 111 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 YTHDC1Q96MU7 727 aaKnown RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 FAM161BQ96MY7 647 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 SETDB2Q96T68 719 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 ACBD3Q9H3P7 528 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 ARHGEF10LQ9HCE6 1279 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 HYPKQ9NX55 129 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 STIM2Q9P246 746 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 DBF4Q9UBU7 674 aaPredicted RBP3.46□□□□□ -1.86
SKP1-204ENST00000517691 ZNF652Q9Y2D9 606 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 COL15A1P39059 1388 aa3.46□□□□□ -1.86
SKP1-204ENST00000517691 USP42Q9H9J4 1324 aaKnown RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 SCN11AQ9UI33 1791 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 TREHO43280 583 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 IBSPP21815 317 aaPredicted RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 GTF2E1P29083 439 aaPredicted RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 DNAJA1P31689 397 aaKnown RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 FMR1Q06787 632 aaKnown RBP eCLIP3.45□□□□□ -1.86
SKP1-204ENST00000517691 SLFN5Q08AF3 891 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 HLFQ16534 295 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 EAPPQ56P03 285 aaPredicted RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 SH3PXD2AQ5TCZ1 1133 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 TBC1D9BQ66K14 1250 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 TTLL7Q6ZT98 887 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 RPUSD2Q8IZ73 545 aaKnown RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 CNPY4Q8N129 248 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 GPATCH11Q8N954 259 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 ZDHHC1Q8WTX9 485 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 CNKSR1Q969H4 720 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 MYO19Q96H55 970 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 ESYT1Q9BSJ8 1104 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 TSEN34Q9BSV6 310 aaKnown RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 FHDC1Q9C0D6 1143 aaPredicted RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 DDX21Q9NR30 783 aaKnown RBP eCLIP3.45□□□□□ -1.86
SKP1-204ENST00000517691 RNF19AQ9NV58 838 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 MAGEC2Q9UBF1 373 aaPredicted RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 PNMA2Q9UL42 364 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 NSFL1CQ9UNZ2 370 aaKnown RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 NIP7Q9Y221 180 aaKnown RBP eCLIP3.45□□□□□ -1.86
SKP1-204ENST00000517691 MRPL42Q9Y6G3 142 aaKnown RBP3.45□□□□□ -1.86
SKP1-204ENST00000517691 C4BP0C0L5 1744 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 NUP188Q5SRE5 1749 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 RREB1Q92766 1687 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 ADAMTS7Q9UKP4 1686 aa3.45□□□□□ -1.86
SKP1-204ENST00000517691 FIGNL2A6NMB9 653 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 EML1O00423 815 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 GNB5O14775 395 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 VAMP4O75379 141 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 CAMTA2O94983 1202 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 SERPINB2P05120 415 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 TAL1P17542 331 aaPredicted RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 GPTP24298 496 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 TM4SF1P30408 202 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 PSMA6P60900 246 aaKnown RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 FOXD4Q12950 439 aaPredicted RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 NFIXQ14938 502 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 PLEKHG6Q3KR16 790 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 ZNF746Q6NUN9 644 aaPredicted RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 CLEC4GQ6UXB4 293 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 NBPF5PQ86XG9 351 aaPredicted RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 MEIOBQ8N635 442 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 TMEM87AQ8NBN3 555 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 STAG1Q8WVM7 1258 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 GMCL1Q96IK5 515 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 CITED4Q96RK1 184 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 PHAXQ9H814 394 aaKnown RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 ZNF395Q9H8N7 513 aaPredicted RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.44□□□□□ -1.865e-6■■■□□ 17.3
SKP1-204ENST00000517691 PRR12Q9ULL5 1215 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 COL4A3BPQ9Y5P4 624 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 RGPD3A6NKT7 1758 aaPredicted RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 RGPD4Q7Z3J3 1758 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 MAP3K15Q6ZN16 1313 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 ZNF521Q96K83 1311 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 LY75O60449 1722 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 ERVV-1B6SEH8 477 aa3.44□□□□□ -1.86
SKP1-204ENST00000517691 POLRMTO00411 1230 aaKnown RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 DDX58O95786 925 aaKnown RBP3.44□□□□□ -1.86
SKP1-204ENST00000517691 ADH1AP07327 375 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms