RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 PLEKHH3Q7Z736 793 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 PAGR1Q9BTK6 254 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 KIAA1683Q9H0B3 1180 aa18.3■□□□□ 0.52
DDR1-278ENST00000515233 DDX60LQ5H9U9 1706 aaKnown RBP18.29■□□□□ 0.52
DDR1-278ENST00000515233 ZKSCAN1P17029 563 aaPredicted RBP18.29■□□□□ 0.52
DDR1-278ENST00000515233 LHX8Q68G74 356 aa18.29■□□□□ 0.52
DDR1-278ENST00000515233 LBX2Q6XYB7 198 aa18.29■□□□□ 0.52
DDR1-278ENST00000515233 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
DDR1-278ENST00000515233 C7orf61Q8IZ16 206 aa18.29■□□□□ 0.52
DDR1-278ENST00000515233 RIOK1Q9BRS2 568 aaKnown RBP18.29■□□□□ 0.52
DDR1-278ENST00000515233 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
DDR1-278ENST00000515233 SOX1O00570 391 aaPredicted RBP18.28■□□□□ 0.52
DDR1-278ENST00000515233 CNMDO75829 334 aa18.28■□□□□ 0.52
DDR1-278ENST00000515233 CCNA1P78396 465 aa18.28■□□□□ 0.52
DDR1-278ENST00000515233 MAP2K5Q13163 448 aa18.28■□□□□ 0.52
DDR1-278ENST00000515233 ABCB5Q2M3G0 1257 aa18.28■□□□□ 0.52
DDR1-278ENST00000515233 EDC3Q96F86 508 aaKnown RBP18.28■□□□□ 0.52
DDR1-278ENST00000515233 FEZ1Q99689 392 aa18.28■□□□□ 0.52
DDR1-278ENST00000515233 APBA2Q99767 749 aa18.28■□□□□ 0.52
DDR1-278ENST00000515233 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
DDR1-278ENST00000515233 PFASO15067 1338 aa18.27■□□□□ 0.52
DDR1-278ENST00000515233 GLRX3O76003 335 aaKnown RBP18.27■□□□□ 0.52
DDR1-278ENST00000515233 COL6A1P12109 1028 aa18.27■□□□□ 0.52
DDR1-278ENST00000515233 PLCD1P51178 756 aa18.27■□□□□ 0.52
DDR1-278ENST00000515233 HNRNPUQ00839 825 aaKnown RBP eCLIP18.27■□□□□ 0.52
DDR1-278ENST00000515233 RAB3GAP1Q15042 981 aa18.27■□□□□ 0.52
DDR1-278ENST00000515233 TTF1Q15361 905 aaPredicted RBP18.27■□□□□ 0.52
DDR1-278ENST00000515233 ZYXQ15942 572 aaKnown RBP18.27■□□□□ 0.52
DDR1-278ENST00000515233 CCL14Q16627 93 aa18.27■□□□□ 0.52
DDR1-278ENST00000515233 HSP90AB4PQ58FF6 505 aa18.27■□□□□ 0.52
DDR1-278ENST00000515233 AACSQ86V21 672 aa18.27■□□□□ 0.52
DDR1-278ENST00000515233 EXOC6BQ9Y2D4 811 aa18.27■□□□□ 0.52
DDR1-278ENST00000515233 VCAM1P19320 739 aa18.26■□□□□ 0.51
DDR1-278ENST00000515233 CCND3P30281 292 aaPredicted RBP18.26■□□□□ 0.51
DDR1-278ENST00000515233 SHMT1P34896 483 aa18.26■□□□□ 0.51
DDR1-278ENST00000515233 GABPAQ06546 454 aa18.26■□□□□ 0.51
DDR1-278ENST00000515233 GPR153Q6NV75 609 aa18.26■□□□□ 0.51
DDR1-278ENST00000515233 ACER1Q8TDN7 264 aa18.26■□□□□ 0.51
DDR1-278ENST00000515233 LRCH3Q96II8 777 aa18.26■□□□□ 0.51
DDR1-278ENST00000515233 ZMYND8Q9ULU4 1186 aaPredicted RBP18.26■□□□□ 0.51
DDR1-278ENST00000515233 MAGEB6P1A0A0J9YX57 407 aa18.25■□□□□ 0.51
DDR1-278ENST00000515233 SLC15A5A6NIM6 579 aa18.25■□□□□ 0.51
DDR1-278ENST00000515233 PTPREP23469 700 aa18.25■□□□□ 0.51
DDR1-278ENST00000515233 GUCY1A2P33402 732 aa18.25■□□□□ 0.51
DDR1-278ENST00000515233 RHPN1Q8TCX5 695 aa18.25■□□□□ 0.51
DDR1-278ENST00000515233 POLR3DP05423 398 aaPredicted RBP18.24■□□□□ 0.51
DDR1-278ENST00000515233 HOXC6P09630 235 aa18.24■□□□□ 0.51
DDR1-278ENST00000515233 LRIT3Q3SXY7 679 aa18.24■□□□□ 0.51
DDR1-278ENST00000515233 SLC9C2Q5TAH2 1124 aa18.24■□□□□ 0.51
DDR1-278ENST00000515233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.24■□□□□ 0.51
DDR1-278ENST00000515233 CWC22Q9HCG8 908 aaKnown RBP18.24■□□□□ 0.51
DDR1-278ENST00000515233 BTBD7Q9P203 1132 aa18.24■□□□□ 0.51
DDR1-278ENST00000515233 SYN1P17600 705 aa18.23■□□□□ 0.51
DDR1-278ENST00000515233 MAGEA10P43363 369 aaPredicted RBP18.23■□□□□ 0.51
DDR1-278ENST00000515233 MFSD14CQ5VZR4 134 aa18.23■□□□□ 0.51
DDR1-278ENST00000515233 CRNKL1Q9BZJ0 848 aaKnown RBP18.23■□□□□ 0.51
DDR1-278ENST00000515233 RPAP3Q9H6T3 665 aaPredicted RBP18.23■□□□□ 0.51
DDR1-278ENST00000515233 IL1RAPL2Q9NP60 686 aa18.23■□□□□ 0.51
DDR1-278ENST00000515233 LAMA3Q16787 3333 aa18.23■□□□□ 0.51
DDR1-278ENST00000515233 SPDYE16A6NNV3 312 aaPredicted RBP18.22■□□□□ 0.51
DDR1-278ENST00000515233 PDE6AP16499 860 aa18.22■□□□□ 0.51
DDR1-278ENST00000515233 GRB14Q14449 540 aa18.22■□□□□ 0.51
DDR1-278ENST00000515233 COG2Q14746 738 aa18.22■□□□□ 0.51
DDR1-278ENST00000515233 SEPT2Q15019 361 aa18.22■□□□□ 0.51
DDR1-278ENST00000515233 RPAP2Q8IXW5 612 aaPredicted RBP18.22■□□□□ 0.51
DDR1-278ENST00000515233 CLASRPQ8N2M8 674 aaKnown RBP18.22■□□□□ 0.51
DDR1-278ENST00000515233 MCM9Q9NXL9 1143 aa18.22■□□□□ 0.51
DDR1-278ENST00000515233 HOXC10Q9NYD6 342 aa18.22■□□□□ 0.51
DDR1-278ENST00000515233 FLRT1Q9NZU1 646 aa18.22■□□□□ 0.51
DDR1-278ENST00000515233 IVNS1ABPQ9Y6Y0 642 aa18.22■□□□□ 0.51
DDR1-278ENST00000515233 A0A1W2PRG0 241 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 TCRBV5S4A2TA0A5A2 114 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 MSCO60682 206 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 IGHA2P01877 340 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 WDR78Q5VTH9 848 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 TDHQ8IZJ6 230 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 PANK1Q8TE04 598 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 KIF1BPQ96EK5 621 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 ZNF532Q9HCE3 1301 aa18.21■□□□□ 0.51
DDR1-278ENST00000515233 STRNO43815 780 aa18.2■□□□□ 0.5
DDR1-278ENST00000515233 MS4A1P11836 297 aa18.2■□□□□ 0.5
DDR1-278ENST00000515233 ATP2B2Q01814 1243 aa18.2■□□□□ 0.5
DDR1-278ENST00000515233 LRRC26Q2I0M4 334 aa18.2■□□□□ 0.5
DDR1-278ENST00000515233 NPLOC4Q8TAT6 608 aa18.2■□□□□ 0.5
DDR1-278ENST00000515233 DCP1AQ9NPI6 582 aaPredicted RBP18.2■□□□□ 0.5
DDR1-278ENST00000515233 FRMPD3Q5JV73 1810 aa18.19■□□□□ 0.5
DDR1-278ENST00000515233 TMEM179Q6ZVK1 233 aa18.19■□□□□ 0.5
DDR1-278ENST00000515233 SLC17A8Q8NDX2 589 aa18.19■□□□□ 0.5
DDR1-278ENST00000515233 NAV1Q8NEY1 1877 aa18.19■□□□□ 0.5
DDR1-278ENST00000515233 SDR42E1Q8WUS8 393 aa18.19■□□□□ 0.5
DDR1-278ENST00000515233 LPAR1Q92633 364 aa18.19■□□□□ 0.5
DDR1-278ENST00000515233 UBE2OQ9C0C9 1292 aaKnown RBP18.19■□□□□ 0.5
DDR1-278ENST00000515233 SWAP70Q9UH65 585 aa18.19■□□□□ 0.5
DDR1-278ENST00000515233 DDX20Q9UHI6 824 aaKnown RBP18.19■□□□□ 0.5
DDR1-278ENST00000515233 GOLIM4O00461 696 aa18.18■□□□□ 0.5
DDR1-278ENST00000515233 IFIT2P09913 472 aaKnown RBP18.18■□□□□ 0.5
DDR1-278ENST00000515233 EVX2Q03828 476 aa18.18■□□□□ 0.5
DDR1-278ENST00000515233 MIER1Q8N108 512 aa18.18■□□□□ 0.5
DDR1-278ENST00000515233 MOV10L1Q9BXT6 1211 aaKnown RBP18.18■□□□□ 0.5
DDR1-278ENST00000515233 COL6A3P12111 3177 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms