RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 STOML1Q9UBI4 398 aa8.02□□□□□ -1.13
HMGCS1-207ENST00000514610 RGS13O14921 159 aa8.01□□□□□ -1.13
HMGCS1-207ENST00000514610 INTS3Q68E01 1043 aaKnown RBP8.01□□□□□ -1.13
HMGCS1-207ENST00000514610 UNC5AQ6ZN44 842 aa8.01□□□□□ -1.13
HMGCS1-207ENST00000514610 PHACTR4Q8IZ21 702 aa8.01□□□□□ -1.13
HMGCS1-207ENST00000514610 HIRIP3Q9BW71 556 aaPredicted RBP8.01□□□□□ -1.13
HMGCS1-207ENST00000514610 LTBP3Q9NS15 1303 aa8.01□□□□□ -1.13
HMGCS1-207ENST00000514610 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
HMGCS1-207ENST00000514610 PPP2R5EQ16537 467 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 RSPO4Q2I0M5 234 aaPredicted RBP8□□□□□ -1.13
HMGCS1-207ENST00000514610 TNNI3KQ59H18 835 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 NKAPLQ5M9Q1 402 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 LETMD1Q6P1Q0 360 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 PMFBP1Q8TBY8 1022 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 CCDC74BQ96LY2 380 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 DUSP23Q9BVJ7 150 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 ACTR10Q9NZ32 417 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 CNTNAP4Q9C0A0 1308 aa8□□□□□ -1.13
HMGCS1-207ENST00000514610 EOMESO95936 686 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 FAM87AP0C7U9 286 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 ZAR1Q86SH2 424 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 TMEM192Q8IY95 271 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 CKAP2LQ8IYA6 745 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 CELF2-AS1Q8N7Q2 184 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 MICAL1Q8TDZ2 1067 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 MFSD14AQ96MC6 490 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 TBC1D32Q96NH3 1257 aa7.99□□□□□ -1.13
HMGCS1-207ENST00000514610 FAM170BA6NMN3 283 aa7.98□□□□□ -1.13
HMGCS1-207ENST00000514610 SERINC3Q13530 473 aa7.98□□□□□ -1.13
HMGCS1-207ENST00000514610 RAB33AQ14088 237 aa7.98□□□□□ -1.13
HMGCS1-207ENST00000514610 RNF43Q68DV7 783 aa7.98□□□□□ -1.13
HMGCS1-207ENST00000514610 FAM214BQ7L5A3 538 aa7.98□□□□□ -1.13
HMGCS1-207ENST00000514610 CDH24Q86UP0 819 aa7.98□□□□□ -1.13
HMGCS1-207ENST00000514610 LNPKQ9C0E8 428 aa7.98□□□□□ -1.13
HMGCS1-207ENST00000514610 CEP131Q9UPN4 1083 aa7.98□□□□□ -1.13
HMGCS1-207ENST00000514610 F13BP05160 661 aa7.97□□□□□ -1.13
HMGCS1-207ENST00000514610 H2AFB1P0C5Y9 115 aa7.97□□□□□ -1.13
HMGCS1-207ENST00000514610 H2AFB2P0C5Z0 115 aa7.97□□□□□ -1.13
HMGCS1-207ENST00000514610 XP32Q5T750 250 aa7.97□□□□□ -1.13
HMGCS1-207ENST00000514610 FBXL6Q8N531 539 aa7.97□□□□□ -1.13
HMGCS1-207ENST00000514610 SLC6A18Q96N87 628 aa7.97□□□□□ -1.13
HMGCS1-207ENST00000514610 PCDHB10Q9UN67 800 aa7.97□□□□□ -1.13
HMGCS1-207ENST00000514610 B2RBV5 119 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 GBP1P32455 592 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 CCNFP41002 786 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 NFIAQ12857 509 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 NBPF6Q5VWK0 638 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 LARP1BQ659C4 914 aaKnown RBP7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 OGFOD3Q6PK18 319 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 ZNF765Q7L2R6 523 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 DPH6Q7L8W6 267 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 PPFIBP1Q86W92 1011 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 NBPF4Q96M43 638 aa7.96□□□□□ -1.14
HMGCS1-207ENST00000514610 DYRK3O43781 588 aa7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 FSTP19883 344 aa7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 KLHL6Q8WZ60 621 aa7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 VWCEQ96DN2 955 aa7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 ZNF512BQ96KM6 892 aaPredicted RBP7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 HEXIM2Q96MH2 286 aaKnown RBP7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 KREMEN1Q96MU8 473 aa7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 DBNDD2Q9BQY9 259 aa7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 ST7Q9NRC1 585 aa7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 ZNF214Q9UL59 606 aaPredicted RBP7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 U3KQE9 123 aa7.95□□□□□ -1.14
HMGCS1-207ENST00000514610 C9IYK1 514 aa7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 PMS1P54277 932 aaKnown RBP7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 DDR2Q16832 855 aa7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 TDRD10Q5VZ19 366 aaKnown RBP7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 C6orf15Q6UXA7 325 aaPredicted RBP7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 TRIM55Q9BYV6 548 aa7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 SUCOQ9UBS9 1254 aaKnown RBP7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 R3HCC1Q9Y3T6 440 aaKnown RBP7.94□□□□□ -1.14
HMGCS1-207ENST00000514610 K7ELQ4 463 aaPredicted RBP7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 CLEC3AO75596 197 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 IGLV1-40P01703 118 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 ETV3P41162 512 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 CCDC144BQ3MJ40 725 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 SOGA3Q5TF21 947 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 MRM1Q6IN84 353 aaKnown RBP7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 GIMAP7Q8NHV1 300 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 SHKBP1Q8TBC3 707 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 OSBPL2Q9H1P3 480 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 PHAXQ9H814 394 aaKnown RBP7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 FAM86C1Q9NVL1 165 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 TPX2Q9ULW0 747 aaKnown RBP7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 SLC12A7Q9Y666 1083 aa7.93□□□□□ -1.14
HMGCS1-207ENST00000514610 PRR33A8MZF0 331 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 WDR64B1ANS9 1081 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 LRRN2O75325 713 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 GJB6O95452 261 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 FXNQ16595 210 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 NBPF12Q5TAG4 269 aaPredicted RBP7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 VHLLQ6RSH7 139 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 FAM178BQ8IXR5 827 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 DHRS1Q96LJ7 313 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 PIF1Q9H611 641 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 MAPK8IP1Q9UQF2 711 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 MSRB2Q9Y3D2 182 aa7.92□□□□□ -1.14
HMGCS1-207ENST00000514610 GNPTABQ3T906 1256 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms