RNA–Protein interactions for RNA: ENST00000512462.5

PRDM16-207, Transcript of PR/SET domain 16, humanhuman

TSL 1 (best)

Gene PRDM16, Length 3,723 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-207ENST00000512462 CCDC102AQ96A19 550 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 CAPZA3Q96KX2 299 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 CENPHQ9H3R5 247 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 RTEL1Q9NZ71 1219 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 GUCA1BQ9UMX6 200 aa13.53□□□□□ -0.24
PRDM16-207ENST00000512462 FAM196BA6NMK8 535 aa13.52□□□□□ -0.24
PRDM16-207ENST00000512462 CUTAO60888 179 aa13.52□□□□□ -0.24
PRDM16-207ENST00000512462 ARID4AP29374 1257 aaPredicted RBP13.52□□□□□ -0.24
PRDM16-207ENST00000512462 CALML4Q96GE6 196 aa13.52□□□□□ -0.24
PRDM16-207ENST00000512462 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.52□□□□□ -0.24
PRDM16-207ENST00000512462 GSG1L2A8MUP6 293 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 ZNF500O60304 480 aaPredicted RBP13.52□□□□□ -0.25
PRDM16-207ENST00000512462 CALM1P0DP23 149 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 CALM2P0DP24 149 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 CALM3P0DP25 149 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 FDPSP14324 419 aaKnown RBP13.52□□□□□ -0.25
PRDM16-207ENST00000512462 ZFYVE27Q5T4F4 411 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 FNBP4Q8N3X1 1017 aaPredicted RBP13.52□□□□□ -0.25
PRDM16-207ENST00000512462 IQUBQ8NA54 791 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 PSMB7Q99436 277 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRDM16-207ENST00000512462 EXOC1Q9NV70 894 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 ALS2Q96Q42 1657 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 CCP110O43303 1012 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 PLS1Q14651 629 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 SLC39A14Q15043 492 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 USH1GQ495M9 461 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 HSP90B2PQ58FF3 399 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 TMCO3Q6UWJ1 677 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 IGSF22Q8N9C0 903 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 FEZ1Q99689 392 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 MINPP1Q9UNW1 487 aa13.52□□□□□ -0.25
PRDM16-207ENST00000512462 USP42Q9H9J4 1324 aaKnown RBP13.51□□□□□ -0.25
PRDM16-207ENST00000512462 NEMFO60524 1076 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 CCDC40Q4G0X9 1142 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 CEP89Q96ST8 783 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 PLEKHA4Q9H4M7 779 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 PARP1P09874 1014 aaKnown RBP13.51□□□□□ -0.25
PRDM16-207ENST00000512462 CMA1P23946 247 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 TMEM266Q2M3C6 531 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-207ENST00000512462 USP49Q70CQ1 688 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 TEX2Q8IWB9 1127 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 SYMPKQ92797 1274 aaKnown RBP13.51□□□□□ -0.25
PRDM16-207ENST00000512462 BAG1Q99933 345 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-207ENST00000512462 TMOD2Q9NZR1 351 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 WDHD1O75717 1129 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-207ENST00000512462 HLA-DOAP06340 250 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 IRX3P78415 501 aaPredicted RBP13.51□□□□□ -0.25
PRDM16-207ENST00000512462 MCM6Q14566 821 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 USP17L2Q6R6M4 530 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 KRBA2Q6ZNG9 492 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 LRRC8AQ8IWT6 810 aa13.51□□□□□ -0.25
PRDM16-207ENST00000512462 TTF2Q9UNY4 1162 aaKnown RBP13.51□□□□□ -0.25
PRDM16-207ENST00000512462 PHACTR2O75167 634 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 RHOXF2BP0C7M4 288 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 EXOSC10Q01780 885 aaKnown RBP13.5□□□□□ -0.25
PRDM16-207ENST00000512462 KANK3Q6NY19 840 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 CLEC10AQ8IUN9 316 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 EYA3Q99504 573 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 RHOXF2Q9BQY4 288 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 CARD6Q9BX69 1037 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 SAMSN1Q9NSI8 373 aaKnown RBP13.5□□□□□ -0.25
PRDM16-207ENST00000512462 ZNF215Q9UL58 517 aaPredicted RBP13.5□□□□□ -0.25
PRDM16-207ENST00000512462 CPDO75976 1380 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 BTDP43251 543 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 GSTO1P78417 241 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 ZNF569Q5MCW4 686 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 CCDC181Q5TID7 509 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 RRP36Q96EU6 259 aaKnown RBP13.5□□□□□ -0.25
PRDM16-207ENST00000512462 ZBTB21Q9ULJ3 1066 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 STRCP1A6NGW2 1772 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 RGPD5Q99666 1765 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 OVOS2A0A0G2JMS6 1433 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 USP27XA6NNY8 438 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 AP5Z1O43299 807 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 SLC16A2P36021 539 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 CHMP4BP1P59074 171 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 SP4Q02446 784 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 CCDC70Q6NSX1 233 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 PDLIM2Q96JY6 352 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 SLC4A9Q96Q91 983 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 CDCA7Q9BWT1 371 aaPredicted RBP13.5□□□□□ -0.25
PRDM16-207ENST00000512462 DBNDD1Q9H9R9 158 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 EPB41L4AQ9HCS5 686 aaPredicted RBP13.5□□□□□ -0.25
PRDM16-207ENST00000512462 POLD4Q9HCU8 107 aa13.5□□□□□ -0.25
PRDM16-207ENST00000512462 GRIN1Q05586 938 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 PTPROQ16827 1216 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 TMEM87AQ8NBN3 555 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 MYRIPQ8NFW9 859 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 KIAA1524Q8TCG1 905 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 JADE2Q9NQC1 790 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.49□□□□□ -0.25
PRDM16-207ENST00000512462 KLRF2D3W0D1 207 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 CHMP2AO43633 222 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 GPS2Q13227 327 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 TAF3Q5VWG9 929 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 ATL3Q6DD88 541 aa13.49□□□□□ -0.25
PRDM16-207ENST00000512462 LY9Q9HBG7 655 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms