RNA–Protein interactions for RNA: ENST00000511198.5

GYPB-212, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 444 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-212ENST00000511198 CCDC86Q9H6F5 360 aaKnown RBP8.66□□□□□ -1.02
GYPB-212ENST00000511198 RAD18Q9NS91 495 aa8.66□□□□□ -1.02
GYPB-212ENST00000511198 TMEM39AQ9NV64 488 aa8.66□□□□□ -1.02
GYPB-212ENST00000511198 TNS2Q63HR2 1409 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 PATL2C9JE40 543 aaKnown RBP8.65□□□□□ -1.02
GYPB-212ENST00000511198 COBLO75128 1261 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 PDE3AQ14432 1141 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 DYMQ7RTS9 669 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 NBPF11Q86T75 865 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 PDZD3Q86UT5 571 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 OSBPL7Q9BZF2 842 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 FAM105AQ9NUU6 356 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 PCMTD2Q9NV79 361 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 PPP1R9AQ9ULJ8 1098 aa8.65□□□□□ -1.02
GYPB-212ENST00000511198 TMEM131LA2VDJ0 1609 aa8.65□□□□□ -1.03
GYPB-212ENST00000511198 ADGRB2O60241 1585 aa8.65□□□□□ -1.03
GYPB-212ENST00000511198 NOS1P29475 1434 aa8.64□□□□□ -1.03
GYPB-212ENST00000511198 CCNB3Q8WWL7 1395 aa8.64□□□□□ -1.03
GYPB-212ENST00000511198 KIAA1324LA8MWY0 1029 aaPredicted RBP8.64□□□□□ -1.03
GYPB-212ENST00000511198 WDR64B1ANS9 1081 aa8.64□□□□□ -1.03
GYPB-212ENST00000511198 F13BP05160 661 aa8.64□□□□□ -1.03
GYPB-212ENST00000511198 PAOXQ6QHF9 649 aa8.64□□□□□ -1.03
GYPB-212ENST00000511198 STK35Q8TDR2 534 aa8.64□□□□□ -1.03
GYPB-212ENST00000511198 ZC3H12CQ9C0D7 883 aaKnown RBP8.64□□□□□ -1.03
GYPB-212ENST00000511198 ACSS3Q9H6R3 686 aa8.64□□□□□ -1.03
GYPB-212ENST00000511198 GPN3Q9UHW5 284 aaPredicted RBP8.64□□□□□ -1.03
GYPB-212ENST00000511198 AKAP2Q9Y2D5 859 aa8.64□□□□□ -1.03
GYPB-212ENST00000511198 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 ZNF862O60290 1169 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 GSTP1P09211 210 aaKnown RBP8.63□□□□□ -1.03
GYPB-212ENST00000511198 LIG1P18858 919 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 ADMP35318 185 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 PPP2R3AQ06190 1150 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 ALG1LQ6GMV1 187 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 GATA6Q92908 595 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 SEMA6CQ9H3T2 930 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 PRKAG2Q9UGJ0 569 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 AP4E1Q9UPM8 1137 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 EHBP1L1Q8N3D4 1523 aa8.63□□□□□ -1.03
GYPB-212ENST00000511198 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.62□□□□□ -1.03
GYPB-212ENST00000511198 P4HBP07237 508 aaKnown RBP8.62□□□□□ -1.03
GYPB-212ENST00000511198 NFICP08651 508 aa8.62□□□□□ -1.03
GYPB-212ENST00000511198 XPCQ01831 940 aaPredicted RBP8.62□□□□□ -1.03
GYPB-212ENST00000511198 FBXL6Q8N531 539 aa8.62□□□□□ -1.03
GYPB-212ENST00000511198 YIPF2Q9BWQ6 316 aa8.62□□□□□ -1.03
GYPB-212ENST00000511198 SRCIN1Q9C0H9 1055 aa8.62□□□□□ -1.03
GYPB-212ENST00000511198 PCDHGC5Q9Y5F6 944 aa8.62□□□□□ -1.03
GYPB-212ENST00000511198 CCDC18Q5T9S5 1454 aa8.62□□□□□ -1.03
GYPB-212ENST00000511198 PXDNQ92626 1479 aa8.62□□□□□ -1.03
GYPB-212ENST00000511198 MYO5BQ9ULV0 1848 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 NALCNQ8IZF0 1738 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 TMPRSS2O15393 492 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 SPINK2P20155 84 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 RAB6AP20340 208 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 ASPAP45381 313 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 HTRA3P83110 453 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 KIF4BQ2VIQ3 1234 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
GYPB-212ENST00000511198 SEZ6L2Q6UXD5 910 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 FAM196AQ6ZSG2 479 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 SULF2Q8IWU5 870 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 ZNF526Q8TF50 670 aaPredicted RBP8.61□□□□□ -1.03
GYPB-212ENST00000511198 KRT82Q9NSB4 513 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 CRIM1Q9NZV1 1036 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 CCDC141Q6ZP82 1450 aa8.61□□□□□ -1.03
GYPB-212ENST00000511198 PLCH1Q4KWH8 1693 aa8.6□□□□□ -1.03
GYPB-212ENST00000511198 RPRD2Q5VT52 1461 aaKnown RBP8.6□□□□□ -1.03
GYPB-212ENST00000511198 GSTT1P30711 240 aa8.6□□□□□ -1.03
GYPB-212ENST00000511198 HOXA10P31260 410 aaPredicted RBP8.6□□□□□ -1.03
GYPB-212ENST00000511198 GRIK1P39086 918 aa8.6□□□□□ -1.03
GYPB-212ENST00000511198 ZAR1Q86SH2 424 aa8.6□□□□□ -1.03
GYPB-212ENST00000511198 NECAB3Q96P71 396 aaPredicted RBP8.6□□□□□ -1.03
GYPB-212ENST00000511198 USP32Q8NFA0 1604 aa8.6□□□□□ -1.03
GYPB-212ENST00000511198 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
GYPB-212ENST00000511198 NWD2Q9ULI1 1742 aa8.6□□□□□ -1.03
GYPB-212ENST00000511198 EIF2AK4Q9P2K8 1649 aaKnown RBP8.59□□□□□ -1.03
GYPB-212ENST00000511198 GIPC1O14908 333 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 ADAMTS4O75173 837 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 NME2P22392 152 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 ARNTP27540 789 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 MAP7Q14244 749 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 DTX1Q86Y01 620 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 GIMAP7Q8NHV1 300 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 TBC1D32Q96NH3 1257 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 C1GALT1Q9NS00 363 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 PIM2Q9P1W9 311 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 AATKQ6ZMQ8 1374 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 MAP3K5Q99683 1374 aa8.59□□□□□ -1.03
GYPB-212ENST00000511198 DYNC1LI2O43237 492 aaPredicted RBP8.58□□□□□ -1.04
GYPB-212ENST00000511198 SLFN14P0C7P3 912 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 ATP2B2Q01814 1243 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 ZNF252P-AS1Q0IIN9 211 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 TPTE2Q6XPS3 522 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 AEBP1Q8IUX7 1158 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 KCNB2Q92953 911 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 OSBPL1AQ9BXW6 950 aa8.58□□□□□ -1.04
GYPB-212ENST00000511198 DISC1Q9NRI5 854 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms