RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 STK32BQ9NY57 414 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 PPT2Q9UMR5 302 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 NUP98P52948 1817 aa8.59□□□□□ -1.03
CLCN3-206ENST00000507875 LRP5O75197 1615 aa8.59□□□□□ -1.04
CLCN3-206ENST00000507875 COL15A1P39059 1388 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 KCNQ2O43526 872 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 FSHRP23945 695 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 USP5P45974 858 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 TRMT44Q8IYL2 757 aaKnown RBP8.58□□□□□ -1.04
CLCN3-206ENST00000507875 SYTL4Q96C24 671 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-206ENST00000507875 LRP10Q7Z4F1 713 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 PLBD2Q8NHP8 589 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 BCO2Q9BYV7 579 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 SRCIN1Q9C0H9 1055 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 TNNQ9UQP3 1299 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 USP16Q9Y5T5 823 aa8.58□□□□□ -1.04
CLCN3-206ENST00000507875 ADCY9O60503 1353 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 CLGNO14967 610 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 POLD1P28340 1107 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 NEXNQ0ZGT2 675 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 MYBPC2Q14324 1141 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 TRIP4Q15650 581 aaPredicted RBP8.57□□□□□ -1.04
CLCN3-206ENST00000507875 TSHZ1Q6ZSZ6 1077 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 PTF1AQ7RTS3 328 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 MPNDQ8N594 471 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 LINS1Q8NG48 757 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 MORC4Q8TE76 937 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 SPON1Q9HCB6 807 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 UTYO14607 1347 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 MASP1P48740 699 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 C11orf91Q3C1V1 193 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 KANK3Q6NY19 840 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 ARMCX6Q7L4S7 300 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLCN3-206ENST00000507875 GCC1Q96CN9 775 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 PHACTR1Q9C0D0 580 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 PHAXQ9H814 394 aaKnown RBP8.57□□□□□ -1.04
CLCN3-206ENST00000507875 CNTN3Q9P232 1028 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 ASAP1Q9ULH1 1129 aa8.57□□□□□ -1.04
CLCN3-206ENST00000507875 PALLDQ8WX93 1383 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 HMMRO75330 724 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 CYP19A1P11511 503 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-206ENST00000507875 IL6STP40189 918 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-206ENST00000507875 HSP90AB3PQ58FF7 597 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 SLC27A3Q5K4L6 730 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 BEND3Q5T5X7 828 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 RC3H1Q5TC82 1133 aaKnown RBP8.56□□□□□ -1.04
CLCN3-206ENST00000507875 ANKRD13DQ6ZTN6 518 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 KIAA0907Q7Z7F0 614 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-206ENST00000507875 FERMT3Q86UX7 667 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 SEC16BQ96JE7 1060 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 METTL22Q9BUU2 404 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-206ENST00000507875 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.56□□□□□ -1.042e-6■■■■■ 41.9
CLCN3-206ENST00000507875 FAM8A1Q9UBU6 413 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 LAMB2P55268 1798 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 A0A087WZG4 1122 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 GNAI2P04899 355 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 RGS3P49796 1198 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 LRRC41Q15345 812 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 STAG2Q8N3U4 1231 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 ANKRD44Q8N8A2 993 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 ZNF296Q8WUU4 475 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-206ENST00000507875 SIRPGQ9P1W8 387 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 SCN7AQ01118 1682 aa8.56□□□□□ -1.04
CLCN3-206ENST00000507875 PI4KAP2A4QPH2 592 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 ERVV-1B6SEH8 477 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 SMAD7O15105 426 aaKnown RBP8.55□□□□□ -1.04
CLCN3-206ENST00000507875 ZPR1O75312 459 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 TLR1Q15399 786 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 SLC15A2Q16348 729 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 DALRD3Q5D0E6 543 aaKnown RBP8.55□□□□□ -1.04
CLCN3-206ENST00000507875 PI4KAP1Q8N8J0 262 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 PRPF38AQ8NAV1 312 aaKnown RBP8.55□□□□□ -1.04
CLCN3-206ENST00000507875 MKL1Q969V6 931 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 TSR3Q9UJK0 312 aaKnown RBP8.55□□□□□ -1.04
CLCN3-206ENST00000507875 MAP3K2Q9Y2U5 619 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 CNTNAP4Q9C0A0 1308 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 MYH3P11055 1940 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 LOC102724428A0A0B4J2F2 783 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 SERTM1A2A2V5 107 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 POU3F3P20264 500 aaPredicted RBP8.55□□□□□ -1.04
CLCN3-206ENST00000507875 EIF4A3P38919 411 aaKnown RBP8.55□□□□□ -1.04
CLCN3-206ENST00000507875 SIK1P57059 783 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 RHBDL3P58872 404 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 TRIM28Q13263 835 aaKnown RBP8.55□□□□□ -1.04
CLCN3-206ENST00000507875 ZFYVE27Q5T4F4 411 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 KRBA2Q6ZNG9 492 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 COPS6Q7L5N1 327 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 WDR75Q8IWA0 830 aaKnown RBP8.55□□□□□ -1.04
CLCN3-206ENST00000507875 XAGE3Q8WTP9 111 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 TMEM63CQ9P1W3 806 aa8.55□□□□□ -1.04
CLCN3-206ENST00000507875 QSER1Q2KHR3 1735 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 MYH14Q7Z406 1995 aaKnown RBP8.54□□□□□ -1.04
CLCN3-206ENST00000507875 PRAMEF22A3QJZ6 481 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 PPEF1O14829 653 aaPredicted RBP8.54□□□□□ -1.04
CLCN3-206ENST00000507875 S1PR4O95977 384 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 ADH1BP00325 375 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 GBP2P32456 591 aaPredicted RBP8.54□□□□□ -1.04
CLCN3-206ENST00000507875 TXLNAP40222 546 aa8.54□□□□□ -1.04
CLCN3-206ENST00000507875 SKOR1P84550 965 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms