RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 ARMCX5Q6P1M9 558 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 ZNF710Q8N1W2 664 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 SRBD1Q8N5C6 995 aaKnown RBP25.22■■□□□ 1.63
SPCS3-203ENST00000507678 DHX58Q96C10 678 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 EPSTI1Q96J88 318 aa25.22■■□□□ 1.63
SPCS3-203ENST00000507678 ZSCAN20P17040 1043 aaPredicted RBP25.21■■□□□ 1.63
SPCS3-203ENST00000507678 USP5P45974 858 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 RCAN1P53805 252 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 TRMT44Q8IYL2 757 aaKnown RBP25.21■■□□□ 1.63
SPCS3-203ENST00000507678 DYNLL2Q96FJ2 89 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 CCDC94Q9BW85 323 aaPredicted RBP25.21■■□□□ 1.63
SPCS3-203ENST00000507678 A0A1B0GUL6 1792 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 AFMP43652 599 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 GOLGA8FQ08AF8 430 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 GOLGA8DPQ0D2H9 430 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 FAM196AQ6ZSG2 479 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 PHF20Q9BVI0 1012 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 CEP131Q9UPN4 1083 aa25.21■■□□□ 1.63
SPCS3-203ENST00000507678 IKBKBO14920 756 aa25.2■■□□□ 1.63
SPCS3-203ENST00000507678 PRPF3O43395 683 aaKnown RBP25.2■■□□□ 1.63
SPCS3-203ENST00000507678 CASP1P29466 404 aa25.2■■□□□ 1.63
SPCS3-203ENST00000507678 GSDMDP57764 484 aa25.2■■□□□ 1.63
SPCS3-203ENST00000507678 GRIK5Q16478 980 aa25.2■■□□□ 1.63
SPCS3-203ENST00000507678 CEP135Q66GS9 1140 aa25.2■■□□□ 1.63
SPCS3-203ENST00000507678 MAN1B1Q9UKM7 699 aa25.2■■□□□ 1.63
SPCS3-203ENST00000507678 SRPRBQ9Y5M8 271 aaKnown RBP25.2■■□□□ 1.63
SPCS3-203ENST00000507678 SCN7AQ01118 1682 aa25.2■■□□□ 1.62
SPCS3-203ENST00000507678 SFPQP23246 707 aaKnown RBP eCLIP25.2■■□□□ 1.62
SPCS3-203ENST00000507678 TMTC3Q6ZXV5 915 aa25.2■■□□□ 1.62
SPCS3-203ENST00000507678 RBM28Q9NW13 759 aaKnown RBP25.2■■□□□ 1.62
SPCS3-203ENST00000507678 HOOK1Q9UJC3 728 aaKnown RBP25.2■■□□□ 1.62
SPCS3-203ENST00000507678 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.2■■□□□ 1.62
SPCS3-203ENST00000507678 GTF2F1P35269 517 aaKnown RBP eCLIP25.2■■□□□ 1.62
SPCS3-203ENST00000507678 MDM2Q00987 491 aaPredicted RBP25.2■■□□□ 1.62
SPCS3-203ENST00000507678 TRAPPC3LQ5T215 181 aa25.2■■□□□ 1.62
SPCS3-203ENST00000507678 MYH6P13533 1939 aa25.19■■□□□ 1.62
SPCS3-203ENST00000507678 PTPN14Q15678 1187 aa25.19■■□□□ 1.62
SPCS3-203ENST00000507678 SMARCE1Q969G3 411 aa25.19■■□□□ 1.62
SPCS3-203ENST00000507678 ATP8A2Q9NTI2 1148 aa25.19■■□□□ 1.62
SPCS3-203ENST00000507678 TMEM232C9JQI7 657 aa25.19■■□□□ 1.62
SPCS3-203ENST00000507678 OSBPL5Q9H0X9 879 aaPredicted RBP25.19■■□□□ 1.62
SPCS3-203ENST00000507678 ADAMTS3O15072 1205 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 LDHBP07195 334 aaKnown RBP25.18■■□□□ 1.62
SPCS3-203ENST00000507678 PPP2R5BQ15173 497 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 SH3RF3Q8TEJ3 882 aaPredicted RBP25.18■■□□□ 1.62
SPCS3-203ENST00000507678 CALM1P0DP23 149 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 CALM2P0DP24 149 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 CALM3P0DP25 149 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 NLRP5P59047 1200 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 TFAP4Q01664 338 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 UTP14CQ5TAP6 766 aaKnown RBP25.18■■□□□ 1.62
SPCS3-203ENST00000507678 CNBD1Q8NA66 436 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 STAMQ92783 540 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 BRMS1Q9HCU9 246 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 IMPACTQ9P2X3 320 aa25.18■■□□□ 1.62
SPCS3-203ENST00000507678 ARPP21Q9UBL0 812 aaPredicted RBP25.18■■□□□ 1.62
SPCS3-203ENST00000507678 A0A087X0B3 334 aa25.17■■□□□ 1.62
SPCS3-203ENST00000507678 PIK3AP1Q6ZUJ8 805 aa25.17■■□□□ 1.62
SPCS3-203ENST00000507678 SAP30BPQ9UHR5 308 aaKnown RBP25.17■■□□□ 1.62
SPCS3-203ENST00000507678 CNTNAP5Q8WYK1 1306 aa25.17■■□□□ 1.62
SPCS3-203ENST00000507678 DDAH1O94760 285 aa25.17■■□□□ 1.62
SPCS3-203ENST00000507678 FGRP09769 529 aa25.17■■□□□ 1.62
SPCS3-203ENST00000507678 FMR1Q06787 632 aaKnown RBP eCLIP25.17■■□□□ 1.62
SPCS3-203ENST00000507678 SLC44A5Q8NCS7 719 aa25.17■■□□□ 1.62
SPCS3-203ENST00000507678 VWA3AA6NCI4 1184 aa25.16■■□□□ 1.62
SPCS3-203ENST00000507678 CCAR2Q8N163 923 aaKnown RBP25.16■■□□□ 1.62
SPCS3-203ENST00000507678 TGFBRAP1Q8WUH2 860 aa25.16■■□□□ 1.62
SPCS3-203ENST00000507678 SYMPKQ92797 1274 aaKnown RBP25.16■■□□□ 1.62
SPCS3-203ENST00000507678 BTAF1O14981 1849 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 ACTN4O43707 911 aaKnown RBP25.15■■□□□ 1.62
SPCS3-203ENST00000507678 ORC4O43929 436 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 CDK11BP21127 795 aaKnown RBP25.15■■□□□ 1.62
SPCS3-203ENST00000507678 NAA30Q147X3 362 aaPredicted RBP25.15■■□□□ 1.62
SPCS3-203ENST00000507678 KLHL10Q6JEL2 608 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 CCDC112Q8NEF3 446 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 GPKOWQ92917 476 aaPredicted RBP eCLIP25.15■■□□□ 1.622e-6■■■□□ 15.9
SPCS3-203ENST00000507678 MKNK2Q9HBH9 465 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 USP17L3A6NCW0 530 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 USP17L4A6NCW7 530 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 USP17L1Q7RTZ2 530 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 KAT14Q9H8E8 782 aa25.15■■□□□ 1.62
SPCS3-203ENST00000507678 PCP11498 1178 aaKnown RBP25.14■■□□□ 1.62
SPCS3-203ENST00000507678 TTC38Q5R3I4 469 aa25.14■■□□□ 1.62
SPCS3-203ENST00000507678 CCDC150Q8NCX0 1101 aa25.14■■□□□ 1.62
SPCS3-203ENST00000507678 NFE2L3Q9Y4A8 694 aa25.14■■□□□ 1.62
SPCS3-203ENST00000507678 MCM7P33993 719 aa25.14■■□□□ 1.61
SPCS3-203ENST00000507678 NPY5RQ15761 445 aa25.14■■□□□ 1.61
SPCS3-203ENST00000507678 SPTY2D1Q68D10 685 aaPredicted RBP25.14■■□□□ 1.61
SPCS3-203ENST00000507678 MAPKAPK5Q8IW41 473 aa25.14■■□□□ 1.61
SPCS3-203ENST00000507678 SCG2P13521 617 aa25.13■■□□□ 1.61
SPCS3-203ENST00000507678 PTGDRQ13258 359 aa25.13■■□□□ 1.61
SPCS3-203ENST00000507678 GRAPQ13588 217 aa25.13■■□□□ 1.61
SPCS3-203ENST00000507678 RCSD1Q6JBY9 416 aa25.13■■□□□ 1.61
SPCS3-203ENST00000507678 STAG2Q8N3U4 1231 aa25.13■■□□□ 1.61
SPCS3-203ENST00000507678 ZNF579Q8NAF0 562 aaKnown RBP25.13■■□□□ 1.61
SPCS3-203ENST00000507678 GRAPLQ8TC17 118 aaPredicted RBP25.13■■□□□ 1.61
SPCS3-203ENST00000507678 FNBP4Q8N3X1 1017 aaPredicted RBP25.13■■□□□ 1.61
SPCS3-203ENST00000507678 CBX1P83916 185 aa25.12■■□□□ 1.61
SPCS3-203ENST00000507678 E4F1Q66K89 784 aaPredicted RBP25.12■■□□□ 1.61
SPCS3-203ENST00000507678 RASGRP4Q8TDF6 673 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms