RNA–Protein interactions for RNA: ENST00000506687.5

CPNE4-207, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-207ENST00000506687 EIF6P56537 245 aaKnown RBP6.1□□□□□ -1.43
CPNE4-207ENST00000506687 PAK2Q13177 524 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 COX20Q5RI15 118 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 ATF7IPQ6VMQ6 1270 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 CDC37L1Q7L3B6 337 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 SCUBE3Q8IX30 993 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 JDP2Q8WYK2 163 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 THAP11Q96EK4 314 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 FAM89AQ96GI7 184 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 GLIS2Q9BZE0 524 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-207ENST00000506687 API5Q9BZZ5 524 aaKnown RBP6.1□□□□□ -1.43
CPNE4-207ENST00000506687 USP44Q9H0E7 712 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 PRO3102Q9H379 93 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 ADARB2Q9NS39 739 aaKnown RBP6.1□□□□□ -1.43
CPNE4-207ENST00000506687 CWC25Q9NXE8 425 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-207ENST00000506687 PGAP2Q9UHJ9 254 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 TRMT112Q9UI30 125 aaKnown RBP6.1□□□□□ -1.43
CPNE4-207ENST00000506687 RCAN3Q9UKA8 241 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 POLIQ9UNA4 740 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 TNNQ9UQP3 1299 aa6.1□□□□□ -1.43
CPNE4-207ENST00000506687 KIF16BQ96L93 1317 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 CDHR2Q9BYE9 1310 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 FAM177BA6PVY3 158 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 PPP1R12AO14974 1030 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 IPO8O15397 1037 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 MYCP01106 439 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 S100BP04271 92 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 RLBP1P12271 317 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 HCLS1P14317 486 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 EIF4BP23588 611 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 IARSP41252 1262 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 PSEN2P49810 448 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 ST5P78524 1137 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 PTPN12Q05209 780 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 NEXNQ0ZGT2 675 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 SF3B3Q15393 1217 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 RPUSD2Q8IZ73 545 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 RTKN2Q8IZC4 609 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 C7orf43Q8WVR3 580 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 JARID2Q92833 1246 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 GPRASP2Q96D09 838 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 KAZALD1Q96I82 304 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 RNPC3Q96LT9 517 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 FRMD6Q96NE9 622 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 SRPK1Q96SB4 655 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 PLA2G12BQ9BX93 195 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 SRCIN1Q9C0H9 1055 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 IRF2BPLQ9H1B7 796 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 TSPAN10Q9H1Z9 355 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 DDX56Q9NY93 547 aaKnown RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 MAGEC2Q9UBF1 373 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-207ENST00000506687 GABBR1Q9UBS5 961 aa6.09□□□□□ -1.43
CPNE4-207ENST00000506687 DDX60Q8IY21 1712 aaKnown RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 A0A1W2PRU2 124 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 TMEM229AB2RXF0 380 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 GPR25O00155 361 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 GRM8O00222 908 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 SOX1O00570 391 aaPredicted RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 IRS4O14654 1257 aaPredicted RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 PPP1R12BO60237 982 aaPredicted RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 TBC1D8O95759 1140 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 SSBP05455 408 aaKnown RBP eCLIP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 CSF1RP07333 972 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 NBPF7P0C2Y1 421 aaPredicted RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 CCT4P50991 539 aaKnown RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 RAB15P59190 212 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 FOXO4P98177 505 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 DNM1Q05193 864 aaKnown RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 SERINC3Q13530 473 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 AGERQ15109 404 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 EPHA10Q5JZY3 1008 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 ZKSCAN2Q63HK3 967 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 SLC4A10Q6U841 1118 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 DEFB123Q8N688 67 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 C2orf69Q8N8R5 385 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 TTLL11Q8NHH1 800 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 NKX2-3Q8TAU0 364 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 FBF1Q8TES7 1133 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 MASTLQ96GX5 879 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 LRCH3Q96II8 777 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 NLRP3Q96P20 1036 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 CRAMP1Q96RY5 1269 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 V9GY48 417 aaPredicted RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 LAMB2P55268 1798 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 DLEC1Q9Y238 1755 aa6.08□□□□□ -1.44
CPNE4-207ENST00000506687 COL11A2P13942 1736 aaPredicted RBP6.08□□□□□ -1.44
CPNE4-207ENST00000506687 SLX4Q8IY92 1834 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 PDE8AO60658 829 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 FKTNO75072 461 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 DXOO77932 396 aaKnown RBP6.07□□□□□ -1.44
CPNE4-207ENST00000506687 STAU1O95793 577 aaKnown RBP6.07□□□□□ -1.44
CPNE4-207ENST00000506687 NPR1P16066 1061 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 GTF2E1P29083 439 aaPredicted RBP6.07□□□□□ -1.44
CPNE4-207ENST00000506687 CHMP4BP1P59074 171 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 UBE3BQ7Z3V4 1068 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 GJD3Q8N144 294 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 TMEM57Q8N5G2 664 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 FRAT1Q92837 279 aaPredicted RBP6.07□□□□□ -1.44
CPNE4-207ENST00000506687 SLC10A4Q96EP9 437 aa6.07□□□□□ -1.44
CPNE4-207ENST00000506687 PRR14Q9BWN1 585 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms