RNA–Protein interactions for RNA: ENST00000504905.5

HERC6-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 517 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-205ENST00000504905 ZCCHC17Q9NP64 241 aaKnown RBP24.06■■□□□ 1.44
HERC6-205ENST00000504905 CENPFP49454 3210 aa24.06■■□□□ 1.44
HERC6-205ENST00000504905 RBBP6Q7Z6E9 1792 aaKnown RBP24.06■■□□□ 1.44
HERC6-205ENST00000504905 SLC3A2P08195 630 aaKnown RBP24.05■■□□□ 1.44
HERC6-205ENST00000504905 PPARAQ07869 468 aa24.05■■□□□ 1.44
HERC6-205ENST00000504905 CRHR2Q13324 411 aa24.05■■□□□ 1.44
HERC6-205ENST00000504905 MOGSQ13724 837 aa24.05■■□□□ 1.44
HERC6-205ENST00000504905 ANKRD23Q86SG2 305 aa24.05■■□□□ 1.44
HERC6-205ENST00000504905 RUFY2Q8WXA3 655 aa24.05■■□□□ 1.44
HERC6-205ENST00000504905 MKNK2Q9HBH9 465 aa24.05■■□□□ 1.44
HERC6-205ENST00000504905 ZNF287Q9HBT7 754 aa24.05■■□□□ 1.44
HERC6-205ENST00000504905 LOC285556D6RIA3 1793 aa24.04■■□□□ 1.44
HERC6-205ENST00000504905 AKR1B1P15121 316 aa24.04■■□□□ 1.44
HERC6-205ENST00000504905 CHMLP26374 656 aa24.04■■□□□ 1.44
HERC6-205ENST00000504905 MTMR2Q13614 643 aa24.04■■□□□ 1.44
HERC6-205ENST00000504905 TAF1CQ15572 869 aaPredicted RBP24.04■■□□□ 1.44
HERC6-205ENST00000504905 TMEM179Q6ZVK1 233 aa24.04■■□□□ 1.44
HERC6-205ENST00000504905 CD99L2Q8TCZ2 262 aa24.04■■□□□ 1.44
HERC6-205ENST00000504905 ARMC5Q96C12 935 aa24.04■■□□□ 1.44
HERC6-205ENST00000504905 FGAP02671 866 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 GUCY1A2P33402 732 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 HMGCS2P54868 508 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 BACE1P56817 501 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 PDE4BQ07343 736 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 SEPT2Q15019 361 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 BMP2KLQ5H9B9 411 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 HABP4Q5JVS0 413 aaKnown RBP24.03■■□□□ 1.44
HERC6-205ENST00000504905 ZMYM6O95789 1325 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 RAD50Q92878 1312 aa24.03■■□□□ 1.44
HERC6-205ENST00000504905 USP17L10C9JJH3 530 aa24.02■■□□□ 1.44
HERC6-205ENST00000504905 PDHXO00330 501 aa24.02■■□□□ 1.44
HERC6-205ENST00000504905 SP3Q02447 781 aa24.02■■□□□ 1.44
HERC6-205ENST00000504905 PROCA1Q8NCQ7 364 aaPredicted RBP24.02■■□□□ 1.44
HERC6-205ENST00000504905 FEZ1Q99689 392 aa24.02■■□□□ 1.44
HERC6-205ENST00000504905 EFCC1Q9HA90 598 aa24.02■■□□□ 1.44
HERC6-205ENST00000504905 ZFYVE28Q9HCC9 887 aa24.02■■□□□ 1.44
HERC6-205ENST00000504905 C19orf81C9J6K1 198 aa24.01■■□□□ 1.43
HERC6-205ENST00000504905 RASA1P20936 1047 aa24.01■■□□□ 1.43
HERC6-205ENST00000504905 SH3D19Q5HYK7 790 aa24.01■■□□□ 1.43
HERC6-205ENST00000504905 GPAT2Q6NUI2 795 aa24.01■■□□□ 1.43
HERC6-205ENST00000504905 TMOD4Q9NZQ9 345 aa24.01■■□□□ 1.43
HERC6-205ENST00000504905 PRDM1O75626 825 aa24■■□□□ 1.43
HERC6-205ENST00000504905 CTDSPL2Q05D32 466 aa24■■□□□ 1.43
HERC6-205ENST00000504905 ZNF444Q8N0Y2 327 aaPredicted RBP24■■□□□ 1.43
HERC6-205ENST00000504905 ANAPC4Q9UJX5 808 aa24■■□□□ 1.43
HERC6-205ENST00000504905 AGTPBP1Q9UPW5 1226 aa24■■□□□ 1.43
HERC6-205ENST00000504905 DSCC1Q9BVC3 393 aa23.99■■□□□ 1.43
HERC6-205ENST00000504905 IL25Q9H293 177 aa23.99■■□□□ 1.43
HERC6-205ENST00000504905 SLC45A1Q9Y2W3 748 aa23.99■■□□□ 1.43
HERC6-205ENST00000504905 LAMA4Q16363 1823 aa23.98■■□□□ 1.43
HERC6-205ENST00000504905 GREB1LQ9C091 1923 aaPredicted RBP23.98■■□□□ 1.43
HERC6-205ENST00000504905 USP14P54578 494 aa23.98■■□□□ 1.43
HERC6-205ENST00000504905 CAP1Q01518 475 aa23.98■■□□□ 1.43
HERC6-205ENST00000504905 ICA1Q05084 483 aa23.98■■□□□ 1.43
HERC6-205ENST00000504905 ZYXQ15942 572 aaKnown RBP23.98■■□□□ 1.43
HERC6-205ENST00000504905 TREML2Q5T2D2 321 aa23.98■■□□□ 1.43
HERC6-205ENST00000504905 USP17L2Q6R6M4 530 aa23.98■■□□□ 1.43
HERC6-205ENST00000504905 ACER1Q8TDN7 264 aa23.98■■□□□ 1.43
HERC6-205ENST00000504905 PARK7Q99497 189 aaKnown RBP23.98■■□□□ 1.43
HERC6-205ENST00000504905 ARHGEF10LQ9HCE6 1279 aa23.98■■□□□ 1.43
HERC6-205ENST00000504905 EN2P19622 333 aaPredicted RBP23.97■■□□□ 1.43
HERC6-205ENST00000504905 BRCA2P51587 3418 aa23.97■■□□□ 1.43
HERC6-205ENST00000504905 PABPC4Q13310 644 aaKnown RBP eCLIP23.97■■□□□ 1.43
HERC6-205ENST00000504905 KIAA1683Q9H0B3 1180 aa23.97■■□□□ 1.43
HERC6-205ENST00000504905 KANSL2Q9H9L4 492 aa23.97■■□□□ 1.43
HERC6-205ENST00000504905 SGSM2O43147 1006 aa23.96■■□□□ 1.43
HERC6-205ENST00000504905 TLR2O60603 784 aa23.96■■□□□ 1.43
HERC6-205ENST00000504905 HAND2P61296 217 aa23.96■■□□□ 1.43
HERC6-205ENST00000504905 CLEC10AQ8IUN9 316 aa23.96■■□□□ 1.43
HERC6-205ENST00000504905 EMILIN3Q9NT22 766 aa23.96■■□□□ 1.43
HERC6-205ENST00000504905 CTNNA3Q9UI47 895 aa23.96■■□□□ 1.43
HERC6-205ENST00000504905 PNMA3Q9UL41 463 aa23.96■■□□□ 1.43
HERC6-205ENST00000504905 ATP2B2Q01814 1243 aa23.95■■□□□ 1.42
HERC6-205ENST00000504905 ARHGEF6Q15052 776 aa23.95■■□□□ 1.42
HERC6-205ENST00000504905 SH2D4AQ9H788 454 aa23.95■■□□□ 1.42
HERC6-205ENST00000504905 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.95■■□□□ 1.42
HERC6-205ENST00000504905 KIAA0100Q14667 2235 aaKnown RBP23.95■■□□□ 1.42
HERC6-205ENST00000504905 A0A1W2PRG0 241 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 ZNF213O14771 459 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 TSPY3P0CV98 308 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 TSPY8P0CW00 308 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 CYP2C8P10632 490 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 ZNF333Q96JL9 665 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 C12orf42Q96LP6 360 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.94■■□□□ 1.42
HERC6-205ENST00000504905 TMEM106CQ9BVX2 250 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 INCENPQ9NQS7 918 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 TOMM22Q9NS69 142 aa23.94■■□□□ 1.42
HERC6-205ENST00000504905 MYH4Q9Y623 1939 aa23.93■■□□□ 1.42
HERC6-205ENST00000504905 EEF2P13639 858 aaKnown RBP23.93■■□□□ 1.42
HERC6-205ENST00000504905 OSBPP22059 807 aa23.93■■□□□ 1.42
HERC6-205ENST00000504905 TFAP4Q01664 338 aa23.93■■□□□ 1.42
HERC6-205ENST00000504905 FAM47AQ5JRC9 791 aa23.93■■□□□ 1.42
HERC6-205ENST00000504905 PLIN4Q96Q06 1357 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 TSPY2A6NKD2 308 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 ORC4O43929 436 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 FGRP09769 529 aa23.92■■□□□ 1.42
HERC6-205ENST00000504905 IRX3P78415 501 aaPredicted RBP23.92■■□□□ 1.42
HERC6-205ENST00000504905 IMMTQ16891 758 aaKnown RBP23.92■■□□□ 1.42
HERC6-205ENST00000504905 CASC1Q6TDU7 716 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms