RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 USP17L18D6R9N7 530 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 USP17L22D6RA61 530 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 USP17L17D6RBQ6 530 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 USP17L19D6RCP7 530 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 USP17L20D6RJB6 530 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 GJA8P48165 433 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 EVX2Q03828 476 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 USP17L24Q0WX57 530 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 SEPT2Q15019 361 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 DCTPP1Q9H773 170 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 ATP8A2Q9NTI2 1148 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 SLC4A4Q9Y6R1 1079 aa26.55■■□□□ 1.84
LSM6-203ENST00000503982 UBE3CQ15386 1083 aa26.54■■□□□ 1.84
LSM6-203ENST00000503982 SHISA4Q96DD7 197 aa26.54■■□□□ 1.84
LSM6-203ENST00000503982 TXNRD2Q9NNW7 524 aa26.54■■□□□ 1.84
LSM6-203ENST00000503982 SWAP70Q9UH65 585 aa26.54■■□□□ 1.84
LSM6-203ENST00000503982 TFRCP02786 760 aaKnown RBP26.53■■□□□ 1.84
LSM6-203ENST00000503982 CHGBP05060 677 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 CYP2B6P20813 491 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 ERVK-9P63128 1117 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 ERVK-24P63145 666 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 GABPAQ06546 454 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 WDR78Q5VTH9 848 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 SLC44A5Q8NCS7 719 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 U2AF1L4Q8WU68 220 aaKnown RBP26.53■■□□□ 1.84
LSM6-203ENST00000503982 DPF3Q92784 378 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 GCC1Q96CN9 775 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 DYNLL2Q96FJ2 89 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 C12orf42Q96LP6 360 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 KIAA1683Q9H0B3 1180 aa26.53■■□□□ 1.84
LSM6-203ENST00000503982 PLXNB2O15031 1838 aa26.52■■□□□ 1.84
LSM6-203ENST00000503982 TSHZ3Q63HK5 1081 aa26.52■■□□□ 1.84
LSM6-203ENST00000503982 NUDT12Q9BQG2 462 aa26.52■■□□□ 1.84
LSM6-203ENST00000503982 RBPJLQ9UBG7 517 aa26.52■■□□□ 1.84
LSM6-203ENST00000503982 ZBTB47Q9UFB7 747 aaPredicted RBP26.52■■□□□ 1.84
LSM6-203ENST00000503982 MKI67P46013 3256 aaKnown RBP26.51■■□□□ 1.83
LSM6-203ENST00000503982 VCAM1P19320 739 aa26.51■■□□□ 1.83
LSM6-203ENST00000503982 MAPK4P31152 587 aa26.51■■□□□ 1.83
LSM6-203ENST00000503982 DEFB118Q96PH6 123 aa26.51■■□□□ 1.83
LSM6-203ENST00000503982 RPAP3Q9H6T3 665 aaPredicted RBP26.51■■□□□ 1.83
LSM6-203ENST00000503982 SGPL1O95470 568 aa26.5■■□□□ 1.83
LSM6-203ENST00000503982 HMGCRP04035 888 aa26.5■■□□□ 1.83
LSM6-203ENST00000503982 GUCY1A2P33402 732 aa26.5■■□□□ 1.83
LSM6-203ENST00000503982 RRP1P56182 461 aaKnown RBP26.5■■□□□ 1.83
LSM6-203ENST00000503982 Q3C1V9 767 aa26.5■■□□□ 1.83
LSM6-203ENST00000503982 CATSPERGQ6ZRH7 1159 aa26.5■■□□□ 1.83
LSM6-203ENST00000503982 TMEM179Q6ZVK1 233 aa26.5■■□□□ 1.83
LSM6-203ENST00000503982 PUS7LQ9H0K6 701 aaKnown RBP26.5■■□□□ 1.83
LSM6-203ENST00000503982 CYP2D7A0A087X1C5 515 aa26.49■■□□□ 1.83
LSM6-203ENST00000503982 USP17L12C9JPN9 530 aa26.49■■□□□ 1.83
LSM6-203ENST00000503982 USP17L21D6R901 530 aa26.49■■□□□ 1.83
LSM6-203ENST00000503982 FARP2O94887 1054 aaPredicted RBP26.49■■□□□ 1.83
LSM6-203ENST00000503982 CCNA1P78396 465 aa26.49■■□□□ 1.83
LSM6-203ENST00000503982 SOCS4Q8WXH5 440 aa26.49■■□□□ 1.83
LSM6-203ENST00000503982 PLEKHH3Q7Z736 793 aa26.48■■□□□ 1.83
LSM6-203ENST00000503982 HTATIP2Q9BUP3 242 aa26.48■■□□□ 1.83
LSM6-203ENST00000503982 TANGO6Q9C0B7 1094 aa26.48■■□□□ 1.83
LSM6-203ENST00000503982 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.48■■□□□ 1.83
LSM6-203ENST00000503982 ARHGEF10LQ9HCE6 1279 aa26.48■■□□□ 1.83
LSM6-203ENST00000503982 GJD2Q9UKL4 321 aa26.48■■□□□ 1.83
LSM6-203ENST00000503982 RABGAP1Q9Y3P9 1069 aa26.48■■□□□ 1.83
LSM6-203ENST00000503982 SLC34A2O95436 690 aa26.47■■□□□ 1.83
LSM6-203ENST00000503982 AKR1B1P15121 316 aa26.47■■□□□ 1.83
LSM6-203ENST00000503982 ATP2B2Q01814 1243 aa26.47■■□□□ 1.83
LSM6-203ENST00000503982 SAMD1Q6SPF0 538 aaPredicted RBP26.47■■□□□ 1.83
LSM6-203ENST00000503982 GPR142Q7Z601 462 aa26.47■■□□□ 1.83
LSM6-203ENST00000503982 PORCNQ9H237 461 aa26.47■■□□□ 1.83
LSM6-203ENST00000503982 PCDHB15Q9Y5E8 787 aa26.47■■□□□ 1.83
LSM6-203ENST00000503982 GLRX3O76003 335 aaKnown RBP26.46■■□□□ 1.83
LSM6-203ENST00000503982 CDK8P49336 464 aa26.46■■□□□ 1.83
LSM6-203ENST00000503982 ICA1Q05084 483 aa26.46■■□□□ 1.83
LSM6-203ENST00000503982 C12orf60Q5U649 245 aa26.46■■□□□ 1.83
LSM6-203ENST00000503982 STK11IPQ8N1F8 1099 aa26.46■■□□□ 1.83
LSM6-203ENST00000503982 KBTBD3Q8NAB2 608 aa26.46■■□□□ 1.83
LSM6-203ENST00000503982 SH2D4AQ9H788 454 aa26.46■■□□□ 1.83
LSM6-203ENST00000503982 HMX1Q9NP08 348 aaPredicted RBP26.46■■□□□ 1.83
LSM6-203ENST00000503982 A0A1W2PRG0 241 aa26.45■■□□□ 1.82
LSM6-203ENST00000503982 ERC2O15083 957 aa26.45■■□□□ 1.82
LSM6-203ENST00000503982 ZKSCAN1P17029 563 aaPredicted RBP26.45■■□□□ 1.82
LSM6-203ENST00000503982 RGS2P41220 211 aa26.45■■□□□ 1.82
LSM6-203ENST00000503982 TRIM32Q13049 653 aa26.45■■□□□ 1.82
LSM6-203ENST00000503982 LRRFIP1Q32MZ4 808 aaKnown RBP26.45■■□□□ 1.82
LSM6-203ENST00000503982 TRIB2Q92519 343 aa26.45■■□□□ 1.82
LSM6-203ENST00000503982 RAD21O60216 631 aa26.44■■□□□ 1.82
LSM6-203ENST00000503982 CTR9Q6PD62 1173 aa26.44■■□□□ 1.82
LSM6-203ENST00000503982 CLEC10AQ8IUN9 316 aa26.44■■□□□ 1.82
LSM6-203ENST00000503982 APPBP2Q92624 585 aa26.44■■□□□ 1.82
LSM6-203ENST00000503982 CCDC17Q96LX7 622 aa26.44■■□□□ 1.82
LSM6-203ENST00000503982 CRBNQ96SW2 442 aa26.44■■□□□ 1.82
LSM6-203ENST00000503982 PAK6Q9NQU5 681 aaPredicted RBP26.44■■□□□ 1.82
LSM6-203ENST00000503982 ARPP21Q9UBL0 812 aaPredicted RBP26.44■■□□□ 1.82
LSM6-203ENST00000503982 IVNS1ABPQ9Y6Y0 642 aa26.44■■□□□ 1.82
LSM6-203ENST00000503982 RPTORQ8N122 1335 aa26.43■■□□□ 1.82
LSM6-203ENST00000503982 RNF113AO15541 343 aaKnown RBP26.43■■□□□ 1.82
LSM6-203ENST00000503982 APPP05067 770 aa26.43■■□□□ 1.82
LSM6-203ENST00000503982 C16orf86Q6ZW13 317 aa26.43■■□□□ 1.82
LSM6-203ENST00000503982 TRMT44Q8IYL2 757 aaKnown RBP26.43■■□□□ 1.82
LSM6-203ENST00000503982 SPDYE16A6NNV3 312 aaPredicted RBP26.42■■□□□ 1.82
LSM6-203ENST00000503982 MINDY4BA8MYZ0 360 aa26.42■■□□□ 1.82
LSM6-203ENST00000503982 SMIM22K7EJ46 135 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms