RNA–Protein interactions for RNA: ENST00000498872.2

AP004609.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP004609.1, Length 1,646 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004609.1-201ENST00000498872 CASC1Q6TDU7 716 aa20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 TTC6Q86TZ1 520 aa20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 LCORLQ8N3X6 602 aa20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 SLAIN1Q8ND83 568 aa20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 SDR42E1Q8WUS8 393 aa20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 COA7Q96BR5 231 aa20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 SHISA4Q96DD7 197 aa20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 PAG1Q9NWQ8 432 aa20.41■□□□□ 0.86
AP004609.1-201ENST00000498872 CHGBP05060 677 aa20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 POLR3DP05423 398 aaPredicted RBP20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 UBXN2AP68543 259 aa20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 RAB3GAP1Q15042 981 aa20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 P2RX7Q99572 595 aaKnown RBP20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 CRNKL1Q9BZJ0 848 aaKnown RBP20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 UNC93B1Q9H1C4 597 aa20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 EHD4Q9H223 541 aa20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 BAZ2AQ9UIF9 1905 aaKnown RBP20.4■□□□□ 0.86
AP004609.1-201ENST00000498872 C19orf81C9J6K1 198 aa20.39■□□□□ 0.86
AP004609.1-201ENST00000498872 SLC34A2O95436 690 aa20.39■□□□□ 0.86
AP004609.1-201ENST00000498872 CERKLQ49MI3 558 aaPredicted RBP20.39■□□□□ 0.86
AP004609.1-201ENST00000498872 TMED8Q6PL24 325 aaPredicted RBP20.39■□□□□ 0.86
AP004609.1-201ENST00000498872 ARMT1Q9H993 441 aa20.39■□□□□ 0.86
AP004609.1-201ENST00000498872 EMILIN3Q9NT22 766 aa20.39■□□□□ 0.86
AP004609.1-201ENST00000498872 MCM9Q9NXL9 1143 aa20.39■□□□□ 0.86
AP004609.1-201ENST00000498872 INHAP05111 366 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 ATP5JP18859 108 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 FEZ1Q99689 392 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 GINM1Q9NU53 330 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 MYH8P13535 1937 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 PLXNB2O15031 1838 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 HOXA7P31268 230 aaPredicted RBP20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 SHMT1P34896 483 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 HERVK_113P62684 666 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 ABCB5Q2M3G0 1257 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 TXNRD2Q9NNW7 524 aa20.38■□□□□ 0.85
AP004609.1-201ENST00000498872 PRKAB2O43741 272 aa20.37■□□□□ 0.85
AP004609.1-201ENST00000498872 CYP2D6P10635 497 aa20.37■□□□□ 0.85
AP004609.1-201ENST00000498872 GJB1P08034 283 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 ADD2P35612 726 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 GJA8P48165 433 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 IRF5Q13568 498 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 TSHZ3Q63HK5 1081 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 USP17L2Q6R6M4 530 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 ACER1Q8TDN7 264 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 HAUS7Q99871 368 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 PAGR1Q9BTK6 254 aa20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 DCP1AQ9NPI6 582 aaPredicted RBP20.36■□□□□ 0.85
AP004609.1-201ENST00000498872 MBD4O95243 580 aa20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 PXYLP1Q8TE99 480 aa20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 U2AF1L4Q8WU68 220 aaKnown RBP20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 MORF4L1Q9UBU8 362 aa20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 MPHOSPH10O00566 681 aaKnown RBP20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 POTEEQ6S8J3 1075 aa20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 SLC44A5Q8NCS7 719 aa20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 NKX2-3Q8TAU0 364 aa20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 CABP5Q9NP86 173 aa20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 RBPJLQ9UBG7 517 aa20.35■□□□□ 0.85
AP004609.1-201ENST00000498872 SMIM22K7EJ46 135 aa20.34■□□□□ 0.85
AP004609.1-201ENST00000498872 GUCY1A2P33402 732 aa20.34■□□□□ 0.85
AP004609.1-201ENST00000498872 GABPAQ06546 454 aa20.34■□□□□ 0.85
AP004609.1-201ENST00000498872 SEPT2Q15019 361 aa20.34■□□□□ 0.85
AP004609.1-201ENST00000498872 GPRC5AQ8NFJ5 357 aa20.34■□□□□ 0.85
AP004609.1-201ENST00000498872 DYNLL2Q96FJ2 89 aa20.34■□□□□ 0.85
AP004609.1-201ENST00000498872 GJD2Q9UKL4 321 aa20.34■□□□□ 0.85
AP004609.1-201ENST00000498872 Q3C1V9 767 aa20.33■□□□□ 0.84
AP004609.1-201ENST00000498872 DEFB118Q96PH6 123 aa20.33■□□□□ 0.84
AP004609.1-201ENST00000498872 CYP2D7A0A087X1C5 515 aa20.32■□□□□ 0.84
AP004609.1-201ENST00000498872 TRIM32Q13049 653 aa20.32■□□□□ 0.84
AP004609.1-201ENST00000498872 PI4K2BQ8TCG2 481 aa20.32■□□□□ 0.84
AP004609.1-201ENST00000498872 SNX21Q969T3 373 aa20.32■□□□□ 0.84
AP004609.1-201ENST00000498872 KIF2CQ99661 725 aa20.32■□□□□ 0.84
AP004609.1-201ENST00000498872 PORCNQ9H237 461 aa20.32■□□□□ 0.84
AP004609.1-201ENST00000498872 ERC2O15083 957 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 REC8O95072 547 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 SGPL1O95470 568 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 VCAM1P19320 739 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 CYP2B6P20813 491 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 ERVK-9P63128 1117 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 ERVK-24P63145 666 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 KIAA1683Q9H0B3 1180 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 TTC41PQ6P2S7 1318 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 USP14P54578 494 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 CLEC10AQ8IUN9 316 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 HSCBQ8IWL3 235 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 CCAR1Q8IX12 1150 aaKnown RBP20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 C12orf42Q96LP6 360 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 USP26Q9BXU7 913 aa20.31■□□□□ 0.84
AP004609.1-201ENST00000498872 A0A1W2PRG0 241 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 TRIM6-TRIM34B2RNG4 842 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L15C9J2P7 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L13C9JLJ4 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L11C9JVI0 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L18D6R9N7 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L22D6RA61 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L17D6RBQ6 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L19D6RCP7 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 USP17L20D6RJB6 530 aa20.3■□□□□ 0.84
AP004609.1-201ENST00000498872 TFRCP02786 760 aaKnown RBP20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms