RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 SCYL3Q8IZE3 742 aa23.7■■□□□ 1.38
CTSD-206ENST00000497544 NBPF3Q9H094 633 aa23.7■■□□□ 1.38
CTSD-206ENST00000497544 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.7■■□□□ 1.38
CTSD-206ENST00000497544 RANBP2P49792 3224 aaKnown RBP23.69■■□□□ 1.38
CTSD-206ENST00000497544 ORC4O43929 436 aa23.69■■□□□ 1.38
CTSD-206ENST00000497544 RANBP6O60518 1105 aaKnown RBP23.69■■□□□ 1.38
CTSD-206ENST00000497544 FGRP09769 529 aa23.69■■□□□ 1.38
CTSD-206ENST00000497544 RASA1P20936 1047 aa23.69■■□□□ 1.38
CTSD-206ENST00000497544 TRDNQ13061 729 aa23.69■■□□□ 1.38
CTSD-206ENST00000497544 VGLL4Q14135 290 aa23.69■■□□□ 1.38
CTSD-206ENST00000497544 NOL9Q5SY16 702 aaKnown RBP23.69■■□□□ 1.38
CTSD-206ENST00000497544 CFHR5Q9BXR6 569 aa23.69■■□□□ 1.38
CTSD-206ENST00000497544 GINM1Q9NU53 330 aa23.69■■□□□ 1.38
CTSD-206ENST00000497544 TACC3Q9Y6A5 838 aa23.69■■□□□ 1.38
CTSD-206ENST00000497544 LAMA4Q16363 1823 aa23.68■■□□□ 1.38
CTSD-206ENST00000497544 ASNSP08243 561 aa23.68■■□□□ 1.38
CTSD-206ENST00000497544 HSPA4P34932 840 aa23.68■■□□□ 1.38
CTSD-206ENST00000497544 CLMNQ96JQ2 1002 aa23.68■■□□□ 1.38
CTSD-206ENST00000497544 CNNM2Q9H8M5 875 aa23.68■■□□□ 1.38
CTSD-206ENST00000497544 TRIM17Q9Y577 477 aa23.68■■□□□ 1.38
CTSD-206ENST00000497544 TSPY2A6NKD2 308 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 H0YGN5 161 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 GH2P01242 217 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 TSPY3P0CV98 308 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 TSPY8P0CW00 308 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 AKR1B1P15121 316 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 TFAP4Q01664 338 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 OTOP1Q7RTM1 612 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 KRT23Q9C075 422 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 ELP3Q9H9T3 547 aa23.67■■□□□ 1.38
CTSD-206ENST00000497544 E7EWF7 191 aa23.66■■□□□ 1.38
CTSD-206ENST00000497544 FAM47AQ5JRC9 791 aa23.66■■□□□ 1.38
CTSD-206ENST00000497544 TMEM179Q6ZVK1 233 aa23.66■■□□□ 1.38
CTSD-206ENST00000497544 ESR2Q92731 530 aa23.66■■□□□ 1.38
CTSD-206ENST00000497544 ZBTB21Q9ULJ3 1066 aa23.66■■□□□ 1.38
CTSD-206ENST00000497544 SNCAIPQ9Y6H5 919 aa23.66■■□□□ 1.38
CTSD-206ENST00000497544 NT5C2P49902 561 aa23.65■■□□□ 1.38
CTSD-206ENST00000497544 JAG1P78504 1218 aa23.65■■□□□ 1.38
CTSD-206ENST00000497544 RAB3GAP1Q15042 981 aa23.65■■□□□ 1.38
CTSD-206ENST00000497544 RALYLQ86SE5 291 aaKnown RBP23.65■■□□□ 1.38
CTSD-206ENST00000497544 ERO1BQ86YB8 467 aa23.65■■□□□ 1.38
CTSD-206ENST00000497544 NCOA7Q8NI08 942 aa23.65■■□□□ 1.38
CTSD-206ENST00000497544 UPF2Q9HAU5 1272 aaKnown RBP23.65■■□□□ 1.38
CTSD-206ENST00000497544 USP17L5A8MUK1 530 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 B4E1Z4 1266 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 PTPRAP18433 802 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 KRT32Q14532 448 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 TSGA10IPQ3SY00 556 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 CHRDL2Q6WN34 429 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 NEDD1Q8NHV4 660 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 BACH2Q9BYV9 841 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 TAF6LQ9Y6J9 622 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 DOCK1Q14185 1865 aa23.64■■□□□ 1.37
CTSD-206ENST00000497544 ATAD5Q96QE3 1844 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 OTOFQ9HC10 1997 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 NEDD4P46934 1319 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 MKRN3Q13064 507 aaKnown RBP23.63■■□□□ 1.37
CTSD-206ENST00000497544 SEPT2Q15019 361 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 SHROOM1Q2M3G4 852 aaPredicted RBP23.63■■□□□ 1.37
CTSD-206ENST00000497544 STOX1Q6ZVD7 989 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 RASEFQ8IZ41 740 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 KCNB2Q92953 911 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 ARMC5Q96C12 935 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 AS3MTQ9HBK9 375 aa23.63■■□□□ 1.37
CTSD-206ENST00000497544 KDM4AO75164 1064 aa23.62■■□□□ 1.37
CTSD-206ENST00000497544 PPATQ06203 517 aa23.62■■□□□ 1.37
CTSD-206ENST00000497544 OPTNQ96CV9 577 aa23.62■■□□□ 1.37
CTSD-206ENST00000497544 TBC1D2Q9BYX2 928 aa23.62■■□□□ 1.37
CTSD-206ENST00000497544 KANSL2Q9H9L4 492 aa23.62■■□□□ 1.37
CTSD-206ENST00000497544 ZSWIM5Q9P217 1185 aa23.62■■□□□ 1.37
CTSD-206ENST00000497544 SNX14Q9Y5W7 946 aa23.62■■□□□ 1.37
CTSD-206ENST00000497544 ZHX2Q9Y6X8 837 aa23.62■■□□□ 1.37
CTSD-206ENST00000497544 SPDYE5A6NIY4 337 aa23.61■■□□□ 1.37
CTSD-206ENST00000497544 GUCY1A2P33402 732 aa23.61■■□□□ 1.37
CTSD-206ENST00000497544 MNX1P50219 401 aaPredicted RBP23.61■■□□□ 1.37
CTSD-206ENST00000497544 RBM27Q9P2N5 1060 aaKnown RBP23.61■■□□□ 1.37
CTSD-206ENST00000497544 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.61■■□□□ 1.37
CTSD-206ENST00000497544 SREBF2Q12772 1141 aa23.6■■□□□ 1.37
CTSD-206ENST00000497544 PPP4R3BQ5MIZ7 849 aa23.6■■□□□ 1.37
CTSD-206ENST00000497544 CCDC84Q86UT8 332 aaPredicted RBP23.6■■□□□ 1.37
CTSD-206ENST00000497544 IQCA1Q86XH1 822 aa23.6■■□□□ 1.37
CTSD-206ENST00000497544 CNKSR2Q8WXI2 1034 aa23.6■■□□□ 1.37
CTSD-206ENST00000497544 WNK4Q96J92 1243 aa23.6■■□□□ 1.37
CTSD-206ENST00000497544 NEK1Q96PY6 1258 aa23.6■■□□□ 1.37
CTSD-206ENST00000497544 PTPN22Q9Y2R2 807 aa23.6■■□□□ 1.37
CTSD-206ENST00000497544 ATP2B2Q01814 1243 aa23.59■■□□□ 1.37
CTSD-206ENST00000497544 SPP2Q13103 211 aa23.59■■□□□ 1.37
CTSD-206ENST00000497544 PPIL2Q13356 520 aa23.59■■□□□ 1.37
CTSD-206ENST00000497544 CCDC178Q5BJE1 867 aa23.59■■□□□ 1.37
CTSD-206ENST00000497544 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.59■■□□□ 1.37
CTSD-206ENST00000497544 TCP11L1Q9NUJ3 509 aa23.59■■□□□ 1.37
CTSD-206ENST00000497544 PSMA5P28066 241 aa23.58■■□□□ 1.37
CTSD-206ENST00000497544 ICA1Q05084 483 aa23.58■■□□□ 1.37
CTSD-206ENST00000497544 ADCK5Q3MIX3 580 aa23.58■■□□□ 1.37
CTSD-206ENST00000497544 SPRYD7Q5W111 196 aa23.58■■□□□ 1.37
CTSD-206ENST00000497544 ZNF280CQ8ND82 737 aa23.58■■□□□ 1.37
CTSD-206ENST00000497544 WDR18Q9BV38 432 aa23.58■■□□□ 1.37
CTSD-206ENST00000497544 ARHGEF10LQ9HCE6 1279 aa23.58■■□□□ 1.37
CTSD-206ENST00000497544 AFG3L2Q9Y4W6 797 aa23.58■■□□□ 1.37
CTSD-206ENST00000497544 PLIN4Q96Q06 1357 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 589.5 ms