RNA–Protein interactions for RNA: ENST00000497527.1

HPS1-213, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-213ENST00000497527 CSPP1Q1MSJ5 1256 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 RCSD1Q6JBY9 416 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 PNMA1Q8ND90 353 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 CSRNP1Q96S65 589 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 ZSCAN16Q9H4T2 348 aaPredicted RBP14.17□□□□□ -0.14
HPS1-213ENST00000497527 VEZTQ9HBM0 779 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 IL17RBQ9NRM6 502 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 CNOT7Q9UIV1 285 aaKnown RBP14.17□□□□□ -0.14
HPS1-213ENST00000497527 STX8Q9UNK0 236 aa14.17□□□□□ -0.14
HPS1-213ENST00000497527 CLRN2A0PK11 232 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 DDTLA6NHG4 134 aaPredicted RBP14.16□□□□□ -0.14
HPS1-213ENST00000497527 TCP10L2B9ZVM9 353 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 NMT2O60551 498 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 DEXIO95424 95 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 FMNL1O95466 1100 aaPredicted RBP14.16□□□□□ -0.14
HPS1-213ENST00000497527 RXRAP19793 462 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 ADD1P35611 737 aaKnown RBP14.16□□□□□ -0.14
HPS1-213ENST00000497527 NOVP48745 357 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 PRELPP51888 382 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 TRIM29Q14134 588 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 NTRK3Q16288 839 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 RAB11FIP4Q86YS3 637 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 CCDC144CPQ8IYA2 1237 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 C8orf76Q96K31 380 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 LZTS2Q9BRK4 669 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 MYL10Q9BUA6 226 aa14.16□□□□□ -0.14
HPS1-213ENST00000497527 RNF26Q9BY78 433 aaPredicted RBP14.16□□□□□ -0.14
HPS1-213ENST00000497527 ZNF541Q9H0D2 1346 aa14.15□□□□□ -0.14
HPS1-213ENST00000497527 TBC1D12O60347 775 aa14.15□□□□□ -0.14
HPS1-213ENST00000497527 XBP1P17861 261 aa14.15□□□□□ -0.14
HPS1-213ENST00000497527 CERKLQ49MI3 558 aaPredicted RBP14.15□□□□□ -0.14
HPS1-213ENST00000497527 TATDN1Q6P1N9 297 aa14.15□□□□□ -0.14
HPS1-213ENST00000497527 ZFPM1Q8IX07 1006 aa14.15□□□□□ -0.14
HPS1-213ENST00000497527 CABP5Q9NP86 173 aa14.15□□□□□ -0.14
HPS1-213ENST00000497527 FAM217BQ9NTX9 383 aaPredicted RBP14.15□□□□□ -0.14
HPS1-213ENST00000497527 ZC3H4Q9UPT8 1303 aaKnown RBP14.15□□□□□ -0.15
HPS1-213ENST00000497527 CNTNAP1P78357 1384 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 ATAD5Q96QE3 1844 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 IGKV6D-41A0A0C4DH26 115 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 MPHOSPH10O00566 681 aaKnown RBP14.14□□□□□ -0.15
HPS1-213ENST00000497527 GRIN3BO60391 1043 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 TTLL1O95922 423 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 FDPSP14324 419 aaKnown RBP14.14□□□□□ -0.15
HPS1-213ENST00000497527 AKR1B1P15121 316 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 NBR1Q14596 966 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 GRM4Q14833 912 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 KIF4BQ2VIQ3 1234 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 SKOR2Q2VWA4 1001 aaPredicted RBP14.14□□□□□ -0.15
HPS1-213ENST00000497527 TMEM179Q6ZVK1 233 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 TMTC3Q6ZXV5 915 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 SH3BP5LQ7L8J4 393 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 APOBEC3FQ8IUX4 373 aaKnown RBP14.14□□□□□ -0.15
HPS1-213ENST00000497527 HOOK2Q96ED9 719 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 CEP95Q96GE4 821 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 TMEM47Q9BQJ4 181 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 ALG1Q9BT22 464 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 SLC26A6Q9BXS9 759 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 KANSL2Q9H9L4 492 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 MTMR4Q9NYA4 1195 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 RNF181Q9P0P0 153 aa14.14□□□□□ -0.15
HPS1-213ENST00000497527 PRPF3O43395 683 aaKnown RBP14.13□□□□□ -0.15
HPS1-213ENST00000497527 SMARCA1P28370 1054 aa14.13□□□□□ -0.15
HPS1-213ENST00000497527 LMOD1P29536 600 aaPredicted RBP14.13□□□□□ -0.15
HPS1-213ENST00000497527 ABCB5Q2M3G0 1257 aa14.13□□□□□ -0.15
HPS1-213ENST00000497527 NBPF9Q3BBW0 867 aa14.13□□□□□ -0.15
HPS1-213ENST00000497527 RBM26Q5T8P6 1007 aaKnown RBP14.13□□□□□ -0.15
HPS1-213ENST00000497527 FOXD4L5Q5VV16 416 aaPredicted RBP14.13□□□□□ -0.15
HPS1-213ENST00000497527 CDC37L1Q7L3B6 337 aa14.13□□□□□ -0.15
HPS1-213ENST00000497527 FBXO18Q8NFZ0 1043 aa14.13□□□□□ -0.15
HPS1-213ENST00000497527 FOXD4L4Q8WXT5 416 aaPredicted RBP14.13□□□□□ -0.15
HPS1-213ENST00000497527 ANP32EQ9BTT0 268 aa14.13□□□□□ -0.15
HPS1-213ENST00000497527 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.13□□□□□ -0.15
HPS1-213ENST00000497527 GPRC5DQ9NZD1 345 aa14.13□□□□□ -0.15
HPS1-213ENST00000497527 SYNPO2Q9UMS6 1093 aa14.13□□□□□ -0.15
HPS1-213ENST00000497527 PARP1P09874 1014 aaKnown RBP14.12□□□□□ -0.15
HPS1-213ENST00000497527 YBX3P16989 372 aaKnown RBP eCLIP14.12□□□□□ -0.15
HPS1-213ENST00000497527 ATL3Q6DD88 541 aa14.12□□□□□ -0.15
HPS1-213ENST00000497527 MCTP1Q6DN14 999 aa14.12□□□□□ -0.15
HPS1-213ENST00000497527 FAM177A1Q8N128 213 aaPredicted RBP14.12□□□□□ -0.15
HPS1-213ENST00000497527 PHKBQ93100 1093 aa14.12□□□□□ -0.15
HPS1-213ENST00000497527 DNAJC18Q9H819 358 aa14.12□□□□□ -0.15
HPS1-213ENST00000497527 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
HPS1-213ENST00000497527 NYAP2Q9P242 653 aa14.12□□□□□ -0.15
HPS1-213ENST00000497527 NCLP19338 710 aaKnown RBP14.11□□□□□ -0.15
HPS1-213ENST00000497527 KRT85P78386 507 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 SAFBQ15424 915 aaKnown RBP eCLIP14.11□□□□□ -0.15
HPS1-213ENST00000497527 GPR162Q16538 588 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 ASPRV1Q53RT3 343 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 DPY19L2Q6NUT2 758 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 BRAPQ7Z569 592 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 NBPF11Q86T75 865 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.11□□□□□ -0.15
HPS1-213ENST00000497527 PPP2R3BQ9Y5P8 575 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 CNTNAP5Q8WYK1 1306 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 SCN4AP35499 1836 aa14.11□□□□□ -0.15
HPS1-213ENST00000497527 PALM3A6NDB9 673 aaPredicted RBP14.1□□□□□ -0.15
HPS1-213ENST00000497527 MAP3K10Q02779 954 aa14.1□□□□□ -0.15
HPS1-213ENST00000497527 RASA3Q14644 834 aa14.1□□□□□ -0.15
HPS1-213ENST00000497527 TBC1D10BQ4KMP7 808 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms