RNA–Protein interactions for RNA: ENST00000496172.5

ERGIC3-219, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-219ENST00000496172 AAMPQ13685 434 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 UBE3CQ15386 1083 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 AMOTL1Q8IY63 956 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 LCORLQ8N3X6 602 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 WDR18Q9BV38 432 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 DNAJC18Q9H819 358 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 PRDM6Q9NQX0 595 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 MCM9Q9NXL9 1143 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 MUC3AQ02505 3323 aa12.63□□□□□ -0.39
ERGIC3-219ENST00000496172 CDK5RAP2Q96SN8 1893 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 ERC2O15083 957 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 MBD4O95243 580 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 ELNP15502 786 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 MAGEA10P43363 369 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 HMGCS2P54868 508 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 LRRFIP1Q32MZ4 808 aaKnown RBP12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 CERKLQ49MI3 558 aaPredicted RBP12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 TATDN1Q6P1N9 297 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 C7orf61Q8IZ16 206 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 DIS3LQ8TF46 1054 aaKnown RBP12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 ARMT1Q9H993 441 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 CABP5Q9NP86 173 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 ATP8A2Q9NTI2 1148 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 ZBTB21Q9ULJ3 1066 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 TTC41PQ6P2S7 1318 aa12.62□□□□□ -0.39
ERGIC3-219ENST00000496172 PRUNE2Q8WUY3 3088 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 USP17L10C9JJH3 530 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 POTEB2H3BUK9 544 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 GH2P01242 217 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 BACE1P56817 501 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 MTMR2Q13614 643 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 ABCB5Q2M3G0 1257 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 SH3D19Q5HYK7 790 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 TREML2Q5T2D2 321 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 SDR42E1Q8WUS8 393 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 GUCD1Q96NT3 240 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 TAOK2Q9UL54 1235 aa12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 ZMYND8Q9ULU4 1186 aaPredicted RBP12.61□□□□□ -0.39
ERGIC3-219ENST00000496172 MYH1P12882 1939 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 PHIPQ8WWQ0 1821 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 ZFYP08048 801 aaPredicted RBP12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 GCLCP48506 637 aaPredicted RBP12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 PLCD1P51178 756 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 HDAC1Q13547 482 aaPredicted RBP12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 RAB3GAP1Q15042 981 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 FEZ1Q99689 392 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 DCP1AQ9NPI6 582 aaPredicted RBP12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 SWAP70Q9UH65 585 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 SLC4A4Q9Y6R1 1079 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
ERGIC3-219ENST00000496172 TNPO2O14787 897 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 GLRX3O76003 335 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 IRX3P78415 501 aaPredicted RBP12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 JAG1P78504 1218 aa12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 SLFNL1Q499Z3 407 aa12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 TSHZ3Q63HK5 1081 aa12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 USP17L2Q6R6M4 530 aa12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 UBE2OQ9C0C9 1292 aaKnown RBP12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 SIPA1L1O43166 1804 aa12.59□□□□□ -0.39
ERGIC3-219ENST00000496172 MPHOSPH10O00566 681 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 RNF113AO15541 343 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 PRKAB2O43741 272 aa12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 MX1P20591 662 aa12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 SHMT1P34896 483 aa12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 USP14P54578 494 aa12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 APPBP2Q92624 585 aa12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 PUS7LQ9H0K6 701 aaKnown RBP12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 RWDD1Q9H446 243 aaPredicted RBP12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 C11orf49Q9H6J7 331 aa12.58□□□□□ -0.4
ERGIC3-219ENST00000496172 NAV1Q8NEY1 1877 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 LOC285556D6RIA3 1793 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 HMGCRP04035 888 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 CYP2D6P10635 497 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 GABPAQ06546 454 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 FAM110CQ1W6H9 321 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 SHROOM1Q2M3G4 852 aaPredicted RBP12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 COA7Q96BR5 231 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 ASCC2Q9H1I8 757 aaPredicted RBP12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 OGDHLQ9ULD0 1010 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 PLXNB2O15031 1838 aa12.57□□□□□ -0.4
ERGIC3-219ENST00000496172 CDH23Q9H251 3354 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L12C9JPN9 530 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 USP17L21D6R901 530 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 CHGBP05060 677 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 SYN1P17600 705 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 GNAT2P19087 354 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 ZYXQ15942 572 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 C12orf60Q5U649 245 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 TMEM179Q6ZVK1 233 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 GTF3C2Q8WUA4 911 aaPredicted RBP12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 CCDC17Q96LX7 622 aa12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
ERGIC3-219ENST00000496172 FSD1Q9BTV5 496 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms