RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 RTCBQ9Y3I0 505 aaKnown RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 BAZ2AQ9UIF9 1905 aaKnown RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 TMEM232C9JQI7 657 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 PCP11498 1178 aaKnown RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 NAA30Q147X3 362 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 RC3H1Q5TC82 1133 aaKnown RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 E4F1Q66K89 784 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 TMTC3Q6ZXV5 915 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 ELOA2Q8IYF1 753 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 CTCFLQ8NI51 663 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 ARHGEF1Q92888 912 aaKnown RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 MCM9Q9NXL9 1143 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 CCNL1Q9UK58 526 aaPredicted RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 TSPY2A6NKD2 308 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 CDK11BP21127 795 aaKnown RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 TM4SF1P30408 202 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 GOLGA8FQ08AF8 430 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 GOLGA8DPQ0D2H9 430 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 SLC51AQ86UW1 340 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 DZIP1Q86YF9 867 aaKnown RBP12.82□□□□□ -0.36
CHMP3-209ENST00000494623 BRMS1Q9HCU9 246 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 ATP8A2Q9NTI2 1148 aa12.82□□□□□ -0.36
CHMP3-209ENST00000494623 WNT7AO00755 349 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 ACTN4O43707 911 aaKnown RBP12.81□□□□□ -0.36
CHMP3-209ENST00000494623 NRDCO43847 1150 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 DDAH1O94760 285 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 USP17L8P0C7I0 530 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 AFMP43652 599 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 TRMT44Q8IYL2 757 aaKnown RBP12.81□□□□□ -0.36
CHMP3-209ENST00000494623 ANKIB1Q9P2G1 1089 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 ORC4O43929 436 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 SARSP49591 514 aaKnown RBP12.81□□□□□ -0.36
CHMP3-209ENST00000494623 FMR1Q06787 632 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHMP3-209ENST00000494623 VPS72Q15906 364 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 KANK3Q6NY19 840 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 PDCL2Q8N4E4 241 aa12.81□□□□□ -0.36
CHMP3-209ENST00000494623 COL5A3P25940 1745 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-209ENST00000494623 TOM1O60784 492 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 TOP1P11387 765 aaKnown RBP12.8□□□□□ -0.36
CHMP3-209ENST00000494623 VEGFAP15692 232 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-209ENST00000494623 MORC3Q14149 939 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 PPP4R3BQ5MIZ7 849 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 MLKLQ8NB16 471 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 NFE2L3Q9Y4A8 694 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 DUOX1Q9NRD9 1551 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 A0A087X0B3 334 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 CASP1P29466 404 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 NLRP5P59047 1200 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 NT5DC1Q5TFE4 455 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 VSTM4Q8IW00 320 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 KIF18AQ8NI77 898 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 ANKRD7Q92527 254 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 SYMPKQ92797 1274 aaKnown RBP12.8□□□□□ -0.36
CHMP3-209ENST00000494623 PPP1R13BQ96KQ4 1090 aa12.8□□□□□ -0.36
CHMP3-209ENST00000494623 ARPP21Q9UBL0 812 aaPredicted RBP12.8□□□□□ -0.36
CHMP3-209ENST00000494623 USP5P45974 858 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 TFAP4Q01664 338 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 NCBP1Q09161 790 aaKnown RBP12.79□□□□□ -0.36
CHMP3-209ENST00000494623 CCDC94Q9BW85 323 aaPredicted RBP12.79□□□□□ -0.36
CHMP3-209ENST00000494623 KCND1Q9NSA2 647 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 DACH1Q9UI36 760 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 CNTNAP5Q8WYK1 1306 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 VWA3AA6NCI4 1184 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 RFC4P35249 363 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 PTGDRQ13258 359 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 DHX8Q14562 1220 aaKnown RBP12.79□□□□□ -0.36
CHMP3-209ENST00000494623 NPY5RQ15761 445 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 TTC38Q5R3I4 469 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 PIK3AP1Q6ZUJ8 805 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 DYNLL2Q96FJ2 89 aa12.79□□□□□ -0.36
CHMP3-209ENST00000494623 BAZ2BQ9UIF8 2168 aaKnown RBP12.78□□□□□ -0.36
CHMP3-209ENST00000494623 RGL2O15211 777 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 SBK1Q52WX2 424 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 SPTY2D1Q68D10 685 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-209ENST00000494623 ENOX1Q8TC92 643 aaKnown RBP12.78□□□□□ -0.36
CHMP3-209ENST00000494623 GPR101Q96P66 508 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-209ENST00000494623 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
CHMP3-209ENST00000494623 MTMR7Q9Y216 660 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 PDS5AQ29RF7 1337 aaKnown RBP12.78□□□□□ -0.36
CHMP3-209ENST00000494623 PSDA5PKW4 1024 aaPredicted RBP12.78□□□□□ -0.36
CHMP3-209ENST00000494623 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 MYO1BO43795 1136 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 LDHBP07195 334 aaKnown RBP12.78□□□□□ -0.36
CHMP3-209ENST00000494623 SCG2P13521 617 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 KLHL10Q6JEL2 608 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 STAMQ92783 540 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 TNFRSF25Q93038 417 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 PAGE5Q96GU1 130 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 KAT14Q9H8E8 782 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 INTS13Q9NVM9 706 aa12.78□□□□□ -0.36
CHMP3-209ENST00000494623 MYH6P13533 1939 aa12.77□□□□□ -0.36
CHMP3-209ENST00000494623 SLFN14P0C7P3 912 aa12.77□□□□□ -0.36
CHMP3-209ENST00000494623 TRAPPC3LQ5T215 181 aa12.77□□□□□ -0.36
CHMP3-209ENST00000494623 RCSD1Q6JBY9 416 aa12.77□□□□□ -0.36
CHMP3-209ENST00000494623 SYT10Q6XYQ8 523 aa12.77□□□□□ -0.36
CHMP3-209ENST00000494623 HOMER1Q86YM7 354 aa12.77□□□□□ -0.36
CHMP3-209ENST00000494623 TRIML1Q8N9V2 468 aa12.77□□□□□ -0.36
CHMP3-209ENST00000494623 SH3RF3Q8TEJ3 882 aaPredicted RBP12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms