RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 NOD2Q9HC29 1040 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 C3P01024 1663 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 ZMYM6O95789 1325 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 FERP16591 822 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 PEX19P40855 299 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 SNX1Q13596 522 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 MYSM1Q5VVJ2 828 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 SLC30A9Q6PML9 568 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 METTL16Q86W50 562 aaKnown RBP10.89□□□□□ -0.67
VPS8-225ENST00000492449 NUP58Q9BVL2 599 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 NFE2L3Q9Y4A8 694 aa10.89□□□□□ -0.67
VPS8-225ENST00000492449 WDR17Q8IZU2 1322 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 C5orf60A6NFR6 353 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 HSF2BPO75031 334 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 PPP6R2O75170 966 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 CDC27P30260 824 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 MDH1P40925 334 aaKnown RBP10.88□□□□□ -0.67
VPS8-225ENST00000492449 SCTRP47872 440 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 ELF3P78545 371 aaPredicted RBP10.88□□□□□ -0.67
VPS8-225ENST00000492449 PNOCQ13519 176 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 BLMHQ13867 455 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 SLC39A14Q15043 492 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 RBM12BQ8IXT5 1001 aaKnown RBP10.88□□□□□ -0.67
VPS8-225ENST00000492449 CYFIP2Q96F07 1278 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 UBN2Q6ZU65 1347 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 NPATQ14207 1427 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 ENO4A6NNW6 628 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 ABL1P00519 1130 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 NPM1P06748 294 aaKnown RBP eCLIP10.88□□□□□ -0.67
VPS8-225ENST00000492449 FAM163BP0C2L3 166 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 FBLN1P23142 703 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 MDM2Q00987 491 aaPredicted RBP10.88□□□□□ -0.67
VPS8-225ENST00000492449 GLE1Q53GS7 698 aaKnown RBP10.88□□□□□ -0.67
VPS8-225ENST00000492449 SPECC1Q5M775 1068 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 ANO1Q5XXA6 986 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 CCDC70Q6NSX1 233 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 PLPPR3Q6T4P5 718 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 SYNE3Q6ZMZ3 975 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 SND1Q7KZF4 910 aaKnown RBP eCLIP10.88□□□□□ -0.67
VPS8-225ENST00000492449 GSPT2Q8IYD1 628 aaKnown RBP10.88□□□□□ -0.67
VPS8-225ENST00000492449 CCDC170Q8IYT3 715 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 ACRBPQ8NEB7 543 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 CNKSR1Q969H4 720 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 KDM4CQ9H3R0 1056 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 AKAP12Q02952 1782 aa10.88□□□□□ -0.67
VPS8-225ENST00000492449 PDLIM1O00151 329 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 G3BP1Q13283 466 aaKnown RBP eCLIP10.87□□□□□ -0.67
VPS8-225ENST00000492449 RESP18Q5W5W9 173 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 MTHFD1LQ6UB35 978 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 ARMC9Q7Z3E5 817 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 SDCCAG8Q86SQ7 713 aaPredicted RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 TRIML1Q8N9V2 468 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 ZNF274Q96GC6 653 aaPredicted RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 GDAP1L1Q96MZ0 367 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 ALS2CR12Q96Q35 445 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 RUFY1Q96T51 708 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 RIPOR2Q9Y4F9 1068 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 MRC1P22897 1456 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 SEMA3EO15041 775 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 BUB1BO60566 1050 aaPredicted RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 SETSIPP0DME0 302 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 PAPOLAP51003 745 aaKnown RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 ERVK-24P63145 666 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 THEMIS2Q5TEJ8 643 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 CYP26C1Q6V0L0 522 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 NCAPG2Q86XI2 1143 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 FOXP4Q8IVH2 680 aaPredicted RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 EHBP1Q8NDI1 1231 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 EZH1Q92800 747 aaPredicted RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 RRP36Q96EU6 259 aaKnown RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 MMTAG2Q9BU76 263 aaKnown RBP10.87□□□□□ -0.67
VPS8-225ENST00000492449 HAUS4Q9H6D7 363 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 RGL1Q9NZL6 768 aa10.87□□□□□ -0.67
VPS8-225ENST00000492449 ANO9A1A5B4 782 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 NR1D1P20393 614 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 ERCC5P28715 1186 aaPredicted RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 FMR1Q06787 632 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS8-225ENST00000492449 SAFB2Q14151 953 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS8-225ENST00000492449 FBXL16Q8N461 479 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 ANKRD24Q8TF21 1146 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 ANKRD27Q96NW4 1050 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 MOV10L1Q9BXT6 1211 aaKnown RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 SH3TC1Q8TE82 1336 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 LINGO3P0C6S8 592 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 ALADP13716 330 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 FDPSP14324 419 aaKnown RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 SARSP49591 514 aaKnown RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 CCDC38Q502W7 563 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 ZNF589Q86UQ0 364 aaPredicted RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 TSEN2Q8NCE0 465 aaKnown RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 STAMBPL1Q96FJ0 436 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 ZNF570Q96NI8 536 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 CABP1Q9NZU7 370 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 ADD3Q9UEY8 706 aaKnown RBP10.86□□□□□ -0.67
VPS8-225ENST00000492449 TSPYL4Q9UJ04 414 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 PCDHA5Q9Y5H7 936 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 C4AP0C0L4 1744 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 C4BP0C0L5 1744 aa10.86□□□□□ -0.67
VPS8-225ENST00000492449 MYO5AQ9Y4I1 1855 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms