RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 ZSWIM8A7E2V4 1837 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 CDC45O75419 566 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 APPP05067 770 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 ASNSP08243 561 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 GNAT2P19087 354 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 CDK8P49336 464 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 GIMAP6Q6P9H5 292 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 STK11IPQ8N1F8 1099 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 ZNF280CQ8ND82 737 aa11.13□□□□□ -0.63
BRCA1-219ENST00000491747 GREB1LQ9C091 1923 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-219ENST00000491747 MINDY4BA8MYZ0 360 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 GPR25O00155 361 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 ABCB5Q2M3G0 1257 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 MCMDC2Q4G0Z9 681 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 OTUD7BQ6GQQ9 843 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 CLEC17AQ6ZS10 378 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 C16orf86Q6ZW13 317 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 ZNF296Q8WUU4 475 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-219ENST00000491747 WDR18Q9BV38 432 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 ARPP21Q9UBL0 812 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-219ENST00000491747 PDHXO00330 501 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 TAF1CQ15572 869 aaPredicted RBP11.12□□□□□ -0.63
BRCA1-219ENST00000491747 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 ANKRD23Q86SG2 305 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 ANP32BQ92688 251 aaKnown RBP11.12□□□□□ -0.63
BRCA1-219ENST00000491747 IL25Q9H293 177 aa11.12□□□□□ -0.63
BRCA1-219ENST00000491747 CD2BP2O95400 341 aaKnown RBP11.11□□□□□ -0.63
BRCA1-219ENST00000491747 AKR1B1P15121 316 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 TDO2P48775 406 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 HMGCS2P54868 508 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 CAP1Q01518 475 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 SEPT2Q15019 361 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 TREML2Q5T2D2 321 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 GAS2L3Q86XJ1 694 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 TICAM2Q86XR7 235 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 GINM1Q9NU53 330 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 SWAP70Q9UH65 585 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 TACC3Q9Y6A5 838 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 CCDC173Q0VFZ6 552 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 MTMR2Q13614 643 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 CWC27Q6UX04 472 aaKnown RBP11.11□□□□□ -0.63
BRCA1-219ENST00000491747 CLEC10AQ8IUN9 316 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 ACER1Q8TDN7 264 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 AS3MTQ9HBK9 375 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 ROBO3Q96MS0 1386 aa11.11□□□□□ -0.63
BRCA1-219ENST00000491747 MPHOSPH10O00566 681 aaKnown RBP11.1□□□□□ -0.63
BRCA1-219ENST00000491747 CYP2C8P10632 490 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 BACE1P56817 501 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 RABEP1Q15276 862 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 KLHL40Q2TBA0 621 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
BRCA1-219ENST00000491747 SIAH1Q8IUQ4 282 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 AMOTL1Q8IY63 956 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 ZCCHC17Q9NP64 241 aaKnown RBP11.1□□□□□ -0.63
BRCA1-219ENST00000491747 ADGRA2Q96PE1 1338 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 HSPD1P10809 573 aaKnown RBP11.1□□□□□ -0.63
BRCA1-219ENST00000491747 NOM1Q5C9Z4 860 aaKnown RBP11.1□□□□□ -0.63
BRCA1-219ENST00000491747 NAPBQ9H115 298 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 ZFYVE28Q9HCC9 887 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 CABP5Q9NP86 173 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 INCENPQ9NQS7 918 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 EMILIN3Q9NT22 766 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 FOXD4L1Q9NU39 408 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 CCDC171Q6TFL3 1326 aa11.1□□□□□ -0.63
BRCA1-219ENST00000491747 USP17L10C9JJH3 530 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 RRP9O43818 475 aaKnown RBP11.09□□□□□ -0.63
BRCA1-219ENST00000491747 TLR2O60603 784 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 RASA1P20936 1047 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 NUCB2P80303 420 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 CTDSPL2Q05D32 466 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 PPARAQ07869 468 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 PROCA1Q8NCQ7 364 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-219ENST00000491747 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.09□□□□□ -0.63
BRCA1-219ENST00000491747 NACAP1Q9BZK3 213 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 AGTPBP1Q9UPW5 1226 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 DDX49Q9Y6V7 483 aaKnown RBP11.09□□□□□ -0.63
BRCA1-219ENST00000491747 FKTNO75072 461 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 PRDM1O75626 825 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 FGAP02671 866 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 NASPP49321 788 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-219ENST00000491747 ALX1Q15699 326 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 ZYXQ15942 572 aaKnown RBP11.09□□□□□ -0.63
BRCA1-219ENST00000491747 DIAPH3Q9NSV4 1193 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
BRCA1-219ENST00000491747 MYH4Q9Y623 1939 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 MGAMO43451 1857 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 LAMA4Q16363 1823 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 BAG4O95429 457 aaKnown RBP11.08□□□□□ -0.64
BRCA1-219ENST00000491747 HSP90AA2PQ14568 343 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-219ENST00000491747 C17orf99Q6UX52 265 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 TMEM179Q6ZVK1 233 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 CPA4Q9UI42 421 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 C19orf81C9J6K1 198 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 CHMLP26374 656 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 KIAA1755Q5JYT7 1200 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 CD99L2Q8TCZ2 262 aa11.08□□□□□ -0.64
BRCA1-219ENST00000491747 CCDC17Q96LX7 622 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms