RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 COL6A3P12111 3177 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 USP17L10C9JJH3 530 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 TRIM32Q13049 653 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 CRACR2BQ8N4Y2 399 aaPredicted RBP14.32□□□□□ -0.12
SRSF4-204ENST00000489898 SMCR8Q8TEV9 937 aaPredicted RBP14.32□□□□□ -0.12
SRSF4-204ENST00000489898 OSBP2Q969R2 916 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 P2RX7Q99572 595 aaKnown RBP14.32□□□□□ -0.12
SRSF4-204ENST00000489898 UNC93B1Q9H1C4 597 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 PORCNQ9H237 461 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 AS3MTQ9HBK9 375 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 PAK6Q9NQU5 681 aaPredicted RBP14.32□□□□□ -0.12
SRSF4-204ENST00000489898 ECHDC1Q9NTX5 307 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 PNMA3Q9UL41 463 aa14.32□□□□□ -0.12
SRSF4-204ENST00000489898 CDH23Q9H251 3354 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 FMNL1O95466 1100 aaPredicted RBP14.31□□□□□ -0.12
SRSF4-204ENST00000489898 MYCP01106 439 aaPredicted RBP14.31□□□□□ -0.12
SRSF4-204ENST00000489898 INHAP05111 366 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 CCL5P13501 91 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 AKR1B1P15121 316 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 GCLCP48506 637 aaPredicted RBP14.31□□□□□ -0.12
SRSF4-204ENST00000489898 MNX1P50219 401 aaPredicted RBP14.31□□□□□ -0.12
SRSF4-204ENST00000489898 KIF22Q14807 665 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 SEPT2Q15019 361 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 Q3C1V9 767 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 C12orf60Q5U649 245 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 LBX2Q6XYB7 198 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 KBTBD3Q8NAB2 608 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 SLAIN1Q8ND83 568 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 PXYLP1Q8TE99 480 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 TRIB2Q92519 343 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 CRBNQ96SW2 442 aa14.31□□□□□ -0.12
SRSF4-204ENST00000489898 CRNKL1Q9BZJ0 848 aaKnown RBP14.31□□□□□ -0.12
SRSF4-204ENST00000489898 SPDYE16A6NNV3 312 aaPredicted RBP14.3□□□□□ -0.12
SRSF4-204ENST00000489898 C19orf81C9J6K1 198 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 M0R2C6 588 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 TNPO2O14787 897 aaKnown RBP14.3□□□□□ -0.12
SRSF4-204ENST00000489898 GJA8P48165 433 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 ABCB5Q2M3G0 1257 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 MAP3K21Q5TCX8 1036 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 C16orf86Q6ZW13 317 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 TTC6Q86TZ1 520 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 CHMP4BQ9H444 224 aaKnown RBP14.3□□□□□ -0.12
SRSF4-204ENST00000489898 MCM9Q9NXL9 1143 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 EYSQ5T1H1 3165 aa14.3□□□□□ -0.12
SRSF4-204ENST00000489898 GSG1L2A8MUP6 293 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 ADCY3O60266 1144 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 GJB1P08034 283 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 ERVK-9P63128 1117 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 ERVK-24P63145 666 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 ARHGEF6Q15052 776 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 CERKLQ49MI3 558 aaPredicted RBP14.29□□□□□ -0.12
SRSF4-204ENST00000489898 MORN1Q5T089 497 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 USP17L2Q6R6M4 530 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 STRBPQ96SI9 672 aaKnown RBP14.29□□□□□ -0.12
SRSF4-204ENST00000489898 CRISPLD2Q9H0B8 497 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 ATP8A2Q9NTI2 1148 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 BTBD7Q9P203 1132 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 PLIN4Q96Q06 1357 aa14.29□□□□□ -0.12
SRSF4-204ENST00000489898 ZYXQ15942 572 aaKnown RBP14.28□□□□□ -0.12
SRSF4-204ENST00000489898 CTR9Q6PD62 1173 aa14.28□□□□□ -0.12
SRSF4-204ENST00000489898 CATSPERGQ6ZRH7 1159 aa14.28□□□□□ -0.12
SRSF4-204ENST00000489898 RAET1EQ8TD07 263 aa14.28□□□□□ -0.12
SRSF4-204ENST00000489898 TTC41PQ6P2S7 1318 aa14.27□□□□□ -0.12
SRSF4-204ENST00000489898 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L12C9JPN9 530 aa14.27□□□□□ -0.13
SRSF4-204ENST00000489898 USP17L21D6R901 530 aa14.27□□□□□ -0.13
SRSF4-204ENST00000489898 PABPC4Q13310 644 aaKnown RBP eCLIP14.27□□□□□ -0.13
SRSF4-204ENST00000489898 RAB3GAP1Q15042 981 aa14.27□□□□□ -0.13
SRSF4-204ENST00000489898 NBPF11Q86T75 865 aa14.27□□□□□ -0.13
SRSF4-204ENST00000489898 APPBP2Q92624 585 aa14.27□□□□□ -0.13
SRSF4-204ENST00000489898 SEC62Q99442 399 aaKnown RBP14.27□□□□□ -0.13
SRSF4-204ENST00000489898 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
SRSF4-204ENST00000489898 TACC3Q9Y6A5 838 aa14.27□□□□□ -0.13
SRSF4-204ENST00000489898 CDK8P49336 464 aa14.26□□□□□ -0.13
SRSF4-204ENST00000489898 IRX3P78415 501 aaPredicted RBP14.26□□□□□ -0.13
SRSF4-204ENST00000489898 U2AF1L4Q8WU68 220 aaKnown RBP14.26□□□□□ -0.13
SRSF4-204ENST00000489898 TMOD4Q9NZQ9 345 aa14.26□□□□□ -0.13
SRSF4-204ENST00000489898 POLR3DP05423 398 aaPredicted RBP14.25□□□□□ -0.13
SRSF4-204ENST00000489898 RASA1P20936 1047 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 HOXD10P28358 340 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 HDAC1Q13547 482 aaPredicted RBP14.25□□□□□ -0.13
SRSF4-204ENST00000489898 CCL14Q16627 93 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 SBK1Q52WX2 424 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 TMEM179Q6ZVK1 233 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 GPR142Q7Z601 462 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 REPS2Q8NFH8 660 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 DIS3LQ8TF46 1054 aaKnown RBP14.25□□□□□ -0.13
SRSF4-204ENST00000489898 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.25□□□□□ -0.13
SRSF4-204ENST00000489898 BCL11AQ9H165 835 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 PRO3102Q9H379 93 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 RPAP3Q9H6T3 665 aaPredicted RBP14.25□□□□□ -0.13
SRSF4-204ENST00000489898 FLRT1Q9NZU1 646 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 SWAP70Q9UH65 585 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 TMX2Q9Y320 296 aa14.25□□□□□ -0.13
SRSF4-204ENST00000489898 GPAA1O43292 621 aa14.24□□□□□ -0.13
SRSF4-204ENST00000489898 HMGCRP04035 888 aa14.24□□□□□ -0.13
SRSF4-204ENST00000489898 TMEM106CQ9BVX2 250 aa14.24□□□□□ -0.13
SRSF4-204ENST00000489898 TRIM34Q9BYJ4 488 aa14.24□□□□□ -0.13
SRSF4-204ENST00000489898 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.24□□□□□ -0.13
SRSF4-204ENST00000489898 RNF208Q9H0X6 261 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms