RNA–Protein interactions for RNA: ENST00000489503.5

SMARCD3-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-213ENST00000489503 AGTPBP1Q9UPW5 1226 aa14.64□□□□□ -0.07
SMARCD3-213ENST00000489503 LAMA4Q16363 1823 aa14.64□□□□□ -0.07
SMARCD3-213ENST00000489503 A0A1W2PRG0 241 aa14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 USP17L10C9JJH3 530 aa14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 HSPD1P10809 573 aaKnown RBP14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 SH3D19Q5HYK7 790 aa14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 TMEM179Q6ZVK1 233 aa14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 PROCA1Q8NCQ7 364 aaPredicted RBP14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 INCENPQ9NQS7 918 aa14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 EMILIN3Q9NT22 766 aa14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 TMOD4Q9NZQ9 345 aa14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 TACC3Q9Y6A5 838 aa14.63□□□□□ -0.07
SMARCD3-213ENST00000489503 TLR2O60603 784 aa14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 HAND2P61296 217 aa14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 ATP2B2Q01814 1243 aa14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 ICA1Q05084 483 aa14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 NOM1Q5C9Z4 860 aaKnown RBP14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 ARHGAP39Q9C0H5 1083 aa14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 MCOLN1Q9GZU1 580 aa14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 MKNK2Q9HBH9 465 aa14.62□□□□□ -0.07
SMARCD3-213ENST00000489503 HIP1O00291 1037 aa14.61□□□□□ -0.07
SMARCD3-213ENST00000489503 PEX10O60683 326 aa14.61□□□□□ -0.07
SMARCD3-213ENST00000489503 FGAP02671 866 aa14.61□□□□□ -0.07
SMARCD3-213ENST00000489503 SP3Q02447 781 aa14.61□□□□□ -0.07
SMARCD3-213ENST00000489503 KIAA1755Q5JYT7 1200 aa14.61□□□□□ -0.07
SMARCD3-213ENST00000489503 USP17L2Q6R6M4 530 aa14.61□□□□□ -0.07
SMARCD3-213ENST00000489503 CTU1Q7Z7A3 348 aaKnown RBP14.61□□□□□ -0.07
SMARCD3-213ENST00000489503 VCAM1P19320 739 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 CHMLP26374 656 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 ALX1Q15699 326 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 FAM47AQ5JRC9 791 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 C17orf99Q6UX52 265 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 TICAM2Q86XR7 235 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 SIAH1Q8IUQ4 282 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 SMCR8Q8TEV9 937 aaPredicted RBP14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 CCDC17Q96LX7 622 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 NBPF3Q9H094 633 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 KIAA1683Q9H0B3 1180 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 ASCC2Q9H1I8 757 aaPredicted RBP14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 MYH4Q9Y623 1939 aa14.6□□□□□ -0.07
SMARCD3-213ENST00000489503 C19orf81C9J6K1 198 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 BCRP11274 1271 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 EEF2P13639 858 aaKnown RBP14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 CTGFP29279 349 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 IRX3P78415 501 aaPredicted RBP14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 OTOP1Q7RTM1 612 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 TBC1D10CQ8IV04 446 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 SPICE1Q8N0Z3 855 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 ERO1AQ96HE7 468 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 C12orf42Q96LP6 360 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 TAOK2Q9UL54 1235 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 SLC45A1Q9Y2W3 748 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 TRIM17Q9Y577 477 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 MGAMO43451 1857 aa14.59□□□□□ -0.07
SMARCD3-213ENST00000489503 CAPN15O75808 1086 aa14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 SLC3A2P08195 630 aaKnown RBP14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 MFAP1P55081 439 aaKnown RBP14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 PDE4BQ07343 736 aa14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 ANKRD13CQ8N6S4 541 aa14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 NKX2-3Q8TAU0 364 aa14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 RPAP3Q9H6T3 665 aaPredicted RBP14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 ARHGEF10LQ9HCE6 1279 aa14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 PNMA3Q9UL41 463 aa14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 ZMYM6O95789 1325 aa14.58□□□□□ -0.08
SMARCD3-213ENST00000489503 IGKV6D-41A0A0C4DH26 115 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 RAD21O60216 631 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 OSBPP22059 807 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 USP14P54578 494 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 LACTBP83111 547 aaPredicted RBP14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 TFAP4Q01664 338 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 PABPC4Q13310 644 aaKnown RBP eCLIP14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 RRP12Q5JTH9 1297 aaKnown RBP14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 ZNF444Q8N0Y2 327 aaPredicted RBP14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 CEP95Q96GE4 821 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 ABHD8Q96I13 439 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 P2RX7Q99572 595 aaKnown RBP14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 TOMM22Q9NS69 142 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 ANAPC4Q9UJX5 808 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 RAD50Q92878 1312 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 PLIN4Q96Q06 1357 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 PARP14Q460N5 1801 aa14.57□□□□□ -0.08
SMARCD3-213ENST00000489503 NMT2O60551 498 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 TSPY3P0CV98 308 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 TSPY8P0CW00 308 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 HOXA7P31268 230 aaPredicted RBP14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 HERVK_113P62684 666 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 PTH1RQ03431 593 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 POTEEQ6S8J3 1075 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 LRRC47Q8N1G4 583 aaKnown RBP14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 CHMP4CQ96CF2 233 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 TRIM47Q96LD4 638 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 PAGR1Q9BTK6 254 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 TANGO6Q9C0B7 1094 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 VCPKMTQ9H867 229 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 KANSL2Q9H9L4 492 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 EFCC1Q9HA90 598 aa14.56□□□□□ -0.08
SMARCD3-213ENST00000489503 TXNRD2Q9NNW7 524 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms