RNA–Protein interactions for RNA: ENST00000488459.1

HUWE1-212, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-212ENST00000488459 FAM198AQ9UFP1 575 aa13.08□□□□□ -0.32
HUWE1-212ENST00000488459 KCNJ14Q9UNX9 436 aa13.08□□□□□ -0.32
HUWE1-212ENST00000488459 NID2Q14112 1375 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 GOLGA6L3A6NEY3 463 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 KIF28PB7ZC32 967 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 TCP10L2B9ZVM9 353 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 PRPF3O43395 683 aaKnown RBP13.07□□□□□ -0.32
HUWE1-212ENST00000488459 TOP1P11387 765 aaKnown RBP13.07□□□□□ -0.32
HUWE1-212ENST00000488459 XBP1P17861 261 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 PTGER2P43116 358 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 GNAQP50148 359 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 KIF23Q02241 960 aaPredicted RBP13.07□□□□□ -0.32
HUWE1-212ENST00000488459 CXCL9Q07325 125 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 TNIP1Q15025 636 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 SF3A1Q15459 793 aaKnown RBP13.07□□□□□ -0.32
HUWE1-212ENST00000488459 BRAPQ7Z569 592 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 SRBD1Q8N5C6 995 aaKnown RBP13.07□□□□□ -0.32
HUWE1-212ENST00000488459 SGIP1Q9BQI5 828 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 IDI2Q9BXS1 227 aa13.07□□□□□ -0.32
HUWE1-212ENST00000488459 DHX36Q9H2U1 1008 aaKnown RBP13.07□□□□□ -0.32
HUWE1-212ENST00000488459 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 DDTLA6NHG4 134 aaPredicted RBP13.06□□□□□ -0.32
HUWE1-212ENST00000488459 SLURP2P0DP57 97 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 EIF6P56537 245 aaKnown RBP13.06□□□□□ -0.32
HUWE1-212ENST00000488459 RASSF7Q02833 373 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 GABPAQ06546 454 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 GRM4Q14833 912 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 RBM26Q5T8P6 1007 aaKnown RBP13.06□□□□□ -0.32
HUWE1-212ENST00000488459 ATL3Q6DD88 541 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 NLGN2Q8NFZ4 835 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 BICD2Q8TD16 824 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 CEP95Q96GE4 821 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 USP28Q96RU2 1077 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.06□□□□□ -0.32
HUWE1-212ENST00000488459 RNF26Q9BY78 433 aaPredicted RBP13.06□□□□□ -0.32
HUWE1-212ENST00000488459 FTOQ9C0B1 505 aaKnown RBP eCLIP13.06□□□□□ -0.32
HUWE1-212ENST00000488459 VEZTQ9HBM0 779 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 SPON1Q9HCB6 807 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 PI4KBQ9UBF8 816 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 ZNF70Q9UC06 446 aaPredicted RBP13.06□□□□□ -0.32
HUWE1-212ENST00000488459 CLIP2Q9UDT6 1046 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 GJA3Q9Y6H8 435 aa13.06□□□□□ -0.32
HUWE1-212ENST00000488459 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 FAM196BA6NMK8 535 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 NFKBIEO00221 500 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 ENTPD3O75355 529 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 SHMT1P34896 483 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 STK38Q15208 465 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 SH3BP5LQ7L8J4 393 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 FOXP4Q8IVH2 680 aaPredicted RBP13.05□□□□□ -0.32
HUWE1-212ENST00000488459 AGBL3Q8NEM8 1001 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 GMLQ99445 158 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 VPS54Q9P1Q0 977 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 TMEM63CQ9P1W3 806 aa13.05□□□□□ -0.32
HUWE1-212ENST00000488459 ISY1Q9ULR0 285 aaKnown RBP13.05□□□□□ -0.32
HUWE1-212ENST00000488459 BAZ2AQ9UIF9 1905 aaKnown RBP13.05□□□□□ -0.32
HUWE1-212ENST00000488459 MYH2Q9UKX2 1941 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 RAD21O60216 631 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 PARP1P09874 1014 aaKnown RBP13.04□□□□□ -0.32
HUWE1-212ENST00000488459 ME1P48163 572 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 FUT2Q10981 343 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 CERKLQ49MI3 558 aaPredicted RBP13.04□□□□□ -0.32
HUWE1-212ENST00000488459 MYSM1Q5VVJ2 828 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 ARHGAP27Q6ZUM4 889 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 DIS3L2Q8IYB7 885 aaKnown RBP13.04□□□□□ -0.32
HUWE1-212ENST00000488459 LRRC47Q8N1G4 583 aaKnown RBP13.04□□□□□ -0.32
HUWE1-212ENST00000488459 STAG2Q8N3U4 1231 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 CCDC17Q96LX7 622 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 LZTS2Q9BRK4 669 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 EHD4Q9H223 541 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 VAT1LQ9HCJ6 419 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 MTMR4Q9NYA4 1195 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 RCOR1Q9UKL0 485 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 CLIC4Q9Y696 253 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 ELP1O95163 1332 aa13.04□□□□□ -0.32
HUWE1-212ENST00000488459 BTBD18B2RXH4 712 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 MYO1BO43795 1136 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 NPM3O75607 178 aaKnown RBP13.03□□□□□ -0.32
HUWE1-212ENST00000488459 MMP1P03956 469 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 ATP2B1P20020 1258 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 NLRP5P59047 1200 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 PKN1Q16512 942 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 CCDC183Q5T5S1 534 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 L1TD1Q5T7N2 865 aaKnown RBP13.03□□□□□ -0.32
HUWE1-212ENST00000488459 USP17L2Q6R6M4 530 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 CLEC10AQ8IUN9 316 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 MAP3K14Q99558 947 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 BRMS1Q9HCU9 246 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 RTEL1Q9NZ71 1219 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 MAD2L2Q9UI95 211 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 CHD4Q14839 1912 aa13.03□□□□□ -0.32
HUWE1-212ENST00000488459 SHTN1A0MZ66 631 aa13.02□□□□□ -0.33
HUWE1-212ENST00000488459 SYCE3A1L190 88 aa13.02□□□□□ -0.33
HUWE1-212ENST00000488459 USP17L5A8MUK1 530 aa13.02□□□□□ -0.33
HUWE1-212ENST00000488459 KLRF2D3W0D1 207 aa13.02□□□□□ -0.33
HUWE1-212ENST00000488459 TTLL1O95922 423 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms