RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 CYP2D7A0A087X1C5 515 aa13.64□□□□□ -0.23
NIPAL3-207ENST00000488155 GJB1P08034 283 aa13.64□□□□□ -0.23
NIPAL3-207ENST00000488155 CYP2B6P20813 491 aa13.64□□□□□ -0.23
NIPAL3-207ENST00000488155 GUCY1A2P33402 732 aa13.64□□□□□ -0.23
NIPAL3-207ENST00000488155 GABPAQ06546 454 aa13.64□□□□□ -0.23
NIPAL3-207ENST00000488155 Q3C1V9 767 aa13.64□□□□□ -0.23
NIPAL3-207ENST00000488155 DCTPP1Q9H773 170 aa13.64□□□□□ -0.23
NIPAL3-207ENST00000488155 SMCHD1A6NHR9 2005 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 IRF5Q13568 498 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 CCAR1Q8IX12 1150 aaKnown RBP13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 GPRC5AQ8NFJ5 357 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 PXYLP1Q8TE99 480 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 PUS7LQ9H0K6 701 aaKnown RBP13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 ECHDC1Q9NTX5 307 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 RBPJLQ9UBG7 517 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 MORF4L1Q9UBU8 362 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 GJD2Q9UKL4 321 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 PCDHB15Q9Y5E8 787 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 SLC4A4Q9Y6R1 1079 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 TRIOBPQ9H2D6 2365 aa13.63□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L15C9J2P7 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L13C9JLJ4 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L11C9JVI0 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L18D6R9N7 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L22D6RA61 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L17D6RBQ6 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L19D6RCP7 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L20D6RJB6 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 GJA8P48165 433 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 ERVK-9P63128 1117 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 ERVK-24P63145 666 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L24Q0WX57 530 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 TRIM32Q13049 653 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 UBE3CQ15386 1083 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 POTEEQ6S8J3 1075 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 CLEC10AQ8IUN9 316 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 STK11IPQ8N1F8 1099 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 NKX2-3Q8TAU0 364 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 U2AF1L4Q8WU68 220 aaKnown RBP13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 DPF3Q92784 378 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 DEFB118Q96PH6 123 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 PORCNQ9H237 461 aa13.62□□□□□ -0.23
NIPAL3-207ENST00000488155 A0A1W2PRG0 241 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L12C9JPN9 530 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 USP17L21D6R901 530 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 SGPL1O95470 568 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 TFRCP02786 760 aaKnown RBP13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 AKR1B1P15121 316 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 VCAM1P19320 739 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 USP14P54578 494 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 RRP1P56182 461 aaKnown RBP13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 WDR78Q5VTH9 848 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 ZSCAN25Q6NSZ9 544 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 CATSPERGQ6ZRH7 1159 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 C12orf42Q96LP6 360 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 RPAP3Q9H6T3 665 aaPredicted RBP13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 CWC22Q9HCG8 908 aaKnown RBP13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 ATP8A2Q9NTI2 1148 aa13.61□□□□□ -0.23
NIPAL3-207ENST00000488155 FRMPD3Q5JV73 1810 aa13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 SLC34A2O95436 690 aa13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 SAMD1Q6SPF0 538 aaPredicted RBP13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 AMOTL1Q8IY63 956 aa13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 DDRGK1Q96HY6 314 aa13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 GPATCH3Q96I76 525 aa13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 CRBNQ96SW2 442 aa13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 NUDT12Q9BQG2 462 aa13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
NIPAL3-207ENST00000488155 PLXNA1Q9UIW2 1896 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 CNMDO75829 334 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 FARP2O94887 1054 aaPredicted RBP13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 HMGCRP04035 888 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 CDK8P49336 464 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 ATP2B2Q01814 1243 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 C12orf60Q5U649 245 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 GPR142Q7Z601 462 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 TRIB2Q92519 343 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 SWAP70Q9UH65 585 aa13.59□□□□□ -0.23
NIPAL3-207ENST00000488155 H0YGN5 161 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 MAPK4P31152 587 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 KIAA1755Q5JYT7 1200 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 CTR9Q6PD62 1173 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 TMEM179Q6ZVK1 233 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 PLEKHH3Q7Z736 793 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 SPICE1Q8N0Z3 855 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 KBTBD3Q8NAB2 608 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 GTF3C2Q8WUA4 911 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 OSBP2Q969R2 916 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 STRBPQ96SI9 672 aaKnown RBP13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 TANGO6Q9C0B7 1094 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 PAK6Q9NQU5 681 aaPredicted RBP13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 BTBD7Q9P203 1132 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 RABGAP1Q9Y3P9 1069 aa13.58□□□□□ -0.24
NIPAL3-207ENST00000488155 GREB1LQ9C091 1923 aaPredicted RBP13.57□□□□□ -0.24
NIPAL3-207ENST00000488155 SPDYE16A6NNV3 312 aaPredicted RBP13.57□□□□□ -0.24
NIPAL3-207ENST00000488155 MINDY4BA8MYZ0 360 aa13.57□□□□□ -0.24
NIPAL3-207ENST00000488155 RNF113AO15541 343 aaKnown RBP13.57□□□□□ -0.24
NIPAL3-207ENST00000488155 RAD21O60216 631 aa13.57□□□□□ -0.24
NIPAL3-207ENST00000488155 ICA1Q05084 483 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms