RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 RSBN1LQ6PCB5 846 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-206ENST00000487062 CDC37L1Q7L3B6 337 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 DGKHQ86XP1 1220 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 RAB11FIP4Q86YS3 637 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 CCDC144CPQ8IYA2 1237 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 FANCBQ8NB91 859 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 NUP133Q8WUM0 1156 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 JDP2Q8WYK2 163 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 C8orf76Q96K31 380 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 OSBPL5Q9H0X9 879 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-206ENST00000487062 TAOK3Q9H2K8 898 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 DHX36Q9H2U1 1008 aaKnown RBP8.2□□□□□ -1.1
SF3A3-206ENST00000487062 KAT14Q9H8E8 782 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 SENP2Q9HC62 589 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 ZNF277Q9NRM2 450 aaPredicted RBP8.2□□□□□ -1.1
SF3A3-206ENST00000487062 LMBRD1Q9NUN5 540 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 TMOD2Q9NZR1 351 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 SWAP70Q9UH65 585 aa8.2□□□□□ -1.1
SF3A3-206ENST00000487062 PITPNM1O00562 1244 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 DTNBO60941 627 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 WDHD1O75717 1129 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 RAD17O75943 681 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 FMNL1O95466 1100 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 VIL1P09327 827 aaKnown RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 FDPSP14324 419 aaKnown RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 RXRAP19793 462 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 RASA1P20936 1047 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 CDC27P30260 824 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 KIF5BP33176 963 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 NTRK3Q16288 839 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 KLHL40Q2TBA0 621 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 FOXD4L6Q3SYB3 417 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 PPP4R3BQ5MIZ7 849 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 RBM26Q5T8P6 1007 aaKnown RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 ATL3Q6DD88 541 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 FOXD4L3Q6VB84 417 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 FERMT3Q86UX7 667 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 GPIHBP1Q8IV16 184 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 OGFOD1Q8N543 542 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 AGBL3Q8NEM8 1001 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 NEDD1Q8NHV4 660 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 CTCFLQ8NI51 663 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 ANKS1AQ92625 1134 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 ZNF396Q96N95 335 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 MAP3K14Q99558 947 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 ALG1Q9BT22 464 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 MYL10Q9BUA6 226 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 IDI2Q9BXS1 227 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 SCAND2PQ9GZW5 306 aaPredicted RBP8.19□□□□□ -1.1
SF3A3-206ENST00000487062 SERPINB13Q9UIV8 391 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 BCS1LQ9Y276 419 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 LTBP3Q9NS15 1303 aa8.19□□□□□ -1.1
SF3A3-206ENST00000487062 PSMD14O00487 310 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 TRIM66O15016 1216 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 ENTPD3O75355 529 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 DEXIO95424 95 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 XBP1P17861 261 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 PTGER2P43116 358 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 GNAQP50148 359 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 FOSBP53539 338 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 EVX2Q03828 476 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 DNM1Q05193 864 aaKnown RBP8.18□□□□□ -1.1
SF3A3-206ENST00000487062 RESTQ13127 1097 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 TNIP1Q15025 636 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 DLGAP5Q15398 846 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 CFAP100Q494V2 611 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 CIAPIN1Q6FI81 312 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 USP48Q86UV5 1035 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 CRACR2BQ8N4Y2 399 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-206ENST00000487062 FBXO18Q8NFZ0 1043 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 PHKBQ93100 1093 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 SLC26A6Q9BXS9 759 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 RNF26Q9BY78 433 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-206ENST00000487062 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 EHD4Q9H223 541 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 SPON1Q9HCB6 807 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 DDX4Q9NQI0 724 aaKnown RBP8.18□□□□□ -1.1
SF3A3-206ENST00000487062 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-206ENST00000487062 RBM27Q9P2N5 1060 aaKnown RBP8.18□□□□□ -1.1
SF3A3-206ENST00000487062 CFAP45Q9UL16 551 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 CNPY2Q9Y2B0 182 aa8.18□□□□□ -1.1
SF3A3-206ENST00000487062 COL2A1P02458 1487 aaPredicted RBP8.18□□□□□ -1.1
SF3A3-206ENST00000487062 MYH4Q9Y623 1939 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 FIBPO43427 364 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 NMT2O60551 498 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 MLLT3P42568 568 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-206ENST00000487062 GUCY1B3Q02153 619 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 GABPAQ06546 454 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 TROAPQ12815 778 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 GNL2Q13823 731 aaKnown RBP8.17□□□□□ -1.1
SF3A3-206ENST00000487062 SAFBQ15424 915 aaKnown RBP eCLIP8.17□□□□□ -1.1
SF3A3-206ENST00000487062 RCSD1Q6JBY9 416 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 BRAPQ7Z569 592 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 FOXP4Q8IVH2 680 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-206ENST00000487062 ZSCAN29Q8IWY8 852 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-206ENST00000487062 SLC44A5Q8NCS7 719 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 PNMA1Q8ND90 353 aa8.17□□□□□ -1.1
SF3A3-206ENST00000487062 SYAP1Q96A49 352 aaPredicted RBP8.17□□□□□ -1.1
SF3A3-206ENST00000487062 DDX27Q96GQ7 796 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms