RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 TFRCP02786 760 aaKnown RBP11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 PLCG2P16885 1265 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 CYP2B6P20813 491 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 USP5P45974 858 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 IRF5Q13568 498 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 C8orf34Q49A92 452 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 RHPN1Q8TCX5 695 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 ACER1Q8TDN7 264 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 PXYLP1Q8TE99 480 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 COA7Q96BR5 231 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 RIOK1Q9BRS2 568 aaKnown RBP11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 PORCNQ9H237 461 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 AS3MTQ9HBK9 375 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 PAK6Q9NQU5 681 aaPredicted RBP11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 RBM27Q9P2N5 1060 aaKnown RBP11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 RBPJLQ9UBG7 517 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 PNMA3Q9UL41 463 aa11.34□□□□□ -0.59
TMEM39A-208ENST00000486159 USP17L10C9JJH3 530 aa11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 CNMDO75829 334 aa11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 ASNSP08243 561 aa11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 CYP2D6P10635 497 aa11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 GUCY1A2P33402 732 aa11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 HERVK_113P62684 666 aa11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 TRIB2Q92519 343 aa11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 PAGR1Q9BTK6 254 aa11.33□□□□□ -0.6
TMEM39A-208ENST00000486159 HOXA7P31268 230 aaPredicted RBP11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 SHMT1P34896 483 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 GCLCP48506 637 aaPredicted RBP11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 IRX3P78415 501 aaPredicted RBP11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 CCL14Q16627 93 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 TATDN1Q6P1N9 297 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 NKX2-3Q8TAU0 364 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 SDR42E1Q8WUS8 393 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 DDRGK1Q96HY6 314 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 DNAJC2Q99543 621 aaKnown RBP11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 TRIM34Q9BYJ4 488 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 CRISPLD2Q9H0B8 497 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 TMOD4Q9NZQ9 345 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 MORF4L1Q9UBU8 362 aa11.32□□□□□ -0.6
TMEM39A-208ENST00000486159 TCRBV5S4A2TA0A5A2 114 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 GOLIM4O00461 696 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 PRKAB2O43741 272 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 HLA-DOAP06340 250 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 PDE6AP16499 860 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 PABPC4Q13310 644 aaKnown RBP eCLIP11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 GSE1Q14687 1217 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 RAB3GAP1Q15042 981 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 KIAA1755Q5JYT7 1200 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 ANKRD45Q5TZF3 282 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 SKAP1Q86WV1 359 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 LCORLQ8N3X6 602 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 SLC44A5Q8NCS7 719 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 DYNLL2Q96FJ2 89 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 TBC1D2Q9BYX2 928 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 PRO3102Q9H379 93 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 DDX60LQ5H9U9 1706 aaKnown RBP11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 ZNF532Q9HCE3 1301 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 TRIOBPQ9H2D6 2365 aa11.31□□□□□ -0.6
TMEM39A-208ENST00000486159 SZT2Q5T011 3432 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 NAV1Q8NEY1 1877 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 CYP2D7A0A087X1C5 515 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 MAGEB6P1A0A0J9YX57 407 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 A0A1W2PRG0 241 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 C19orf81C9J6K1 198 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 SMARCA5O60264 1052 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 ERVK-9P63128 1117 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 ERVK-24P63145 666 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 MAP3K12Q12852 859 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 SEPT2Q15019 361 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 CERKLQ49MI3 558 aaPredicted RBP11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 BMP2KLQ5H9B9 411 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 SLC9C2Q5TAH2 1124 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 USP17L2Q6R6M4 530 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 GPRC5AQ8NFJ5 357 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 USP6NLQ92738 828 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 FAM212AQ96EL1 285 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 IPO9Q96P70 1041 aaKnown RBP11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 BOLA2Q9H3K6 86 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 ARMT1Q9H993 441 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 UPF2Q9HAU5 1272 aaKnown RBP11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 FLRT1Q9NZU1 646 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 BTBD7Q9P203 1132 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 STAP2Q9UGK3 403 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 SERPINB13Q9UIV8 391 aa11.3□□□□□ -0.6
TMEM39A-208ENST00000486159 HMGCRP04035 888 aa11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 GABPAQ06546 454 aa11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 ABCB5Q2M3G0 1257 aa11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 MORN1Q5T089 497 aa11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 GPR142Q7Z601 462 aa11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 RASEFQ8IZ41 740 aa11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 RPTORQ8N122 1335 aa11.29□□□□□ -0.6
TMEM39A-208ENST00000486159 SOX1O00570 391 aaPredicted RBP11.28□□□□□ -0.6
TMEM39A-208ENST00000486159 SYN1P17600 705 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms