RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 PGRP06401 933 aa10.54□□□□□ -0.72
UBR3-210ENST00000484596 RPL6Q02878 288 aaKnown RBP10.54□□□□□ -0.72
UBR3-210ENST00000484596 SFRP5Q5T4F7 317 aa10.54□□□□□ -0.72
UBR3-210ENST00000484596 FAM196AQ6ZSG2 479 aa10.54□□□□□ -0.72
UBR3-210ENST00000484596 LRRN4CLQ8ND94 238 aa10.54□□□□□ -0.72
UBR3-210ENST00000484596 TJP2Q9UDY2 1190 aa10.54□□□□□ -0.72
UBR3-210ENST00000484596 RBAK-RBAKDNI3L0D1 243 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 BPNT1O95861 308 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 GARTP22102 1010 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 CLCN7P51798 805 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 IKZF1Q13422 519 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 LCE3BQ5TA77 95 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 SLC23A3Q6PIS1 610 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 VPS37DQ86XT2 251 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 KRTAP1-3Q8IUG1 177 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 DPH2Q9BQC3 489 aaPredicted RBP10.53□□□□□ -0.72
UBR3-210ENST00000484596 CAPN10Q9HC96 672 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 PRDM7Q9NQW5 492 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 PITPNM2Q9BZ72 1349 aa10.53□□□□□ -0.72
UBR3-210ENST00000484596 FAM155AB1AL88 458 aaPredicted RBP10.52□□□□□ -0.73
UBR3-210ENST00000484596 BIN1O00499 593 aa10.52□□□□□ -0.73
UBR3-210ENST00000484596 ZNF865P0CJ78 1059 aaPredicted RBP10.52□□□□□ -0.73
UBR3-210ENST00000484596 MPP2Q14168 576 aa10.52□□□□□ -0.73
UBR3-210ENST00000484596 C22orf34Q6ZV56 151 aa10.52□□□□□ -0.73
UBR3-210ENST00000484596 ATG4DQ86TL0 474 aaPredicted RBP10.52□□□□□ -0.73
UBR3-210ENST00000484596 MRPL41Q8IXM3 137 aaKnown RBP10.52□□□□□ -0.73
UBR3-210ENST00000484596 SLC43A3Q8NBI5 491 aa10.52□□□□□ -0.73
UBR3-210ENST00000484596 HSPA12BQ96MM6 686 aa10.52□□□□□ -0.73
UBR3-210ENST00000484596 GJA8P48165 433 aa10.51□□□□□ -0.73
UBR3-210ENST00000484596 ZP2Q05996 745 aa10.51□□□□□ -0.73
UBR3-210ENST00000484596 PAK2Q13177 524 aa10.51□□□□□ -0.73
UBR3-210ENST00000484596 NAALADL2Q58DX5 795 aa10.51□□□□□ -0.73
UBR3-210ENST00000484596 BNC2Q6ZN30 1099 aaPredicted RBP10.51□□□□□ -0.73
UBR3-210ENST00000484596 MFSD4AQ8N468 514 aa10.51□□□□□ -0.73
UBR3-210ENST00000484596 GPRASP2Q96D09 838 aa10.51□□□□□ -0.73
UBR3-210ENST00000484596 TMEM87BQ96K49 555 aa10.51□□□□□ -0.73
UBR3-210ENST00000484596 LRRC3Q9BY71 257 aa10.51□□□□□ -0.73
UBR3-210ENST00000484596 FAM221AA4D161 298 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 CILPO75339 1184 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 F13A1P00488 732 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 PDE4BQ07343 736 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 CWF19L2Q2TBE0 894 aaKnown RBP10.5□□□□□ -0.73
UBR3-210ENST00000484596 CDKAL1Q5VV42 579 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 SLC6A19Q695T7 634 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 CDH24Q86UP0 819 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 RASGRP4Q8TDF6 673 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 SEMA3GQ9NS98 782 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 CAPN6Q9Y6Q1 641 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
UBR3-210ENST00000484596 CBX7O95931 251 aa10.49□□□□□ -0.73
UBR3-210ENST00000484596 APOBRQ0VD83 1088 aa10.49□□□□□ -0.73
UBR3-210ENST00000484596 COL9A2Q14055 689 aaPredicted RBP10.49□□□□□ -0.73
UBR3-210ENST00000484596 OGFOD2Q6N063 350 aa10.49□□□□□ -0.73
UBR3-210ENST00000484596 ZNF746Q6NUN9 644 aaPredicted RBP10.49□□□□□ -0.73
UBR3-210ENST00000484596 MCATQ8IVS2 390 aaKnown RBP10.49□□□□□ -0.73
UBR3-210ENST00000484596 ACSF2Q96CM8 615 aaPredicted RBP10.49□□□□□ -0.73
UBR3-210ENST00000484596 EAF1Q96JC9 268 aaPredicted RBP10.49□□□□□ -0.73
UBR3-210ENST00000484596 TINF2Q9BSI4 451 aa10.49□□□□□ -0.73
UBR3-210ENST00000484596 CORINQ9Y5Q5 1042 aa10.49□□□□□ -0.73
UBR3-210ENST00000484596 NKD1Q969G9 470 aa10.48□□□□□ -0.73
UBR3-210ENST00000484596 ATP13A1Q9HD20 1204 aa10.48□□□□□ -0.73
UBR3-210ENST00000484596 ADAM30Q9UKF2 790 aa10.48□□□□□ -0.73
UBR3-210ENST00000484596 TNNI2P48788 182 aa10.47□□□□□ -0.73
UBR3-210ENST00000484596 UBP1Q9NZI7 540 aa10.47□□□□□ -0.73
UBR3-210ENST00000484596 ST14Q9Y5Y6 855 aa10.47□□□□□ -0.73
UBR3-210ENST00000484596 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.47□□□□□ -0.73
UBR3-210ENST00000484596 H3BS24 57 aa10.46□□□□□ -0.73
UBR3-210ENST00000484596 CYP7A1P22680 504 aa10.46□□□□□ -0.73
UBR3-210ENST00000484596 SLITRK4Q8IW52 837 aa10.46□□□□□ -0.73
UBR3-210ENST00000484596 LMCD1Q9NZU5 365 aa10.46□□□□□ -0.73
UBR3-210ENST00000484596 REC114Q7Z4M0 266 aa10.45□□□□□ -0.74
UBR3-210ENST00000484596 SEC16BQ96JE7 1060 aa10.45□□□□□ -0.74
UBR3-210ENST00000484596 CARS2Q9HA77 564 aaKnown RBP10.45□□□□□ -0.74
UBR3-210ENST00000484596 UPK3BL1B0FP48 263 aa10.44□□□□□ -0.74
UBR3-210ENST00000484596 UPK3BL2E5RIL1 263 aa10.44□□□□□ -0.74
UBR3-210ENST00000484596 PLCG1P19174 1290 aa10.44□□□□□ -0.74
UBR3-210ENST00000484596 ZNF165P49910 485 aa10.44□□□□□ -0.74
UBR3-210ENST00000484596 ARID5AQ03989 594 aa10.44□□□□□ -0.74
UBR3-210ENST00000484596 TNK2Q07912 1038 aa10.44□□□□□ -0.74
UBR3-210ENST00000484596 FAM168AQ92567 244 aa10.44□□□□□ -0.74
UBR3-210ENST00000484596 COX4I2Q96KJ9 171 aa10.44□□□□□ -0.74
UBR3-210ENST00000484596 TLR3O15455 904 aaKnown RBP10.43□□□□□ -0.74
UBR3-210ENST00000484596 KIR3DL1P43629 444 aa10.43□□□□□ -0.74
UBR3-210ENST00000484596 SF3A1Q15459 793 aaKnown RBP10.43□□□□□ -0.74
UBR3-210ENST00000484596 SEZ6Q53EL9 994 aa10.43□□□□□ -0.74
UBR3-210ENST00000484596 REXO1Q8N1G1 1221 aaKnown RBP10.43□□□□□ -0.74
UBR3-210ENST00000484596 POU5F2Q8N7G0 328 aa10.43□□□□□ -0.74
UBR3-210ENST00000484596 FLAD1Q8NFF5 587 aa10.43□□□□□ -0.74
UBR3-210ENST00000484596 DNAJB8Q8NHS0 232 aa10.43□□□□□ -0.74
UBR3-210ENST00000484596 GMLQ99445 158 aa10.43□□□□□ -0.74
UBR3-210ENST00000484596 CEP131Q9UPN4 1083 aa10.43□□□□□ -0.74
UBR3-210ENST00000484596 YBX3P16989 372 aaKnown RBP eCLIP10.42□□□□□ -0.74
UBR3-210ENST00000484596 ATF4P18848 351 aaPredicted RBP10.42□□□□□ -0.74
UBR3-210ENST00000484596 CRKP46108 304 aa10.42□□□□□ -0.74
UBR3-210ENST00000484596 THAP5Q7Z6K1 395 aa10.42□□□□□ -0.74
UBR3-210ENST00000484596 FBXO27Q8NI29 283 aa10.42□□□□□ -0.74
UBR3-210ENST00000484596 UBE2FQ969M7 185 aa10.42□□□□□ -0.74
UBR3-210ENST00000484596 ZSWIM5Q9P217 1185 aa10.42□□□□□ -0.74
UBR3-210ENST00000484596 CTNND2Q9UQB3 1225 aa10.42□□□□□ -0.74
UBR3-210ENST00000484596 MCM4P33991 863 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms