RNA–Protein interactions for RNA: ENST00000483821.1

RXRB-205, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-205ENST00000483821 XBP1P17861 261 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 NCLP19338 710 aaKnown RBP15.58■□□□□ 0.08
RXRB-205ENST00000483821 RXRAP19793 462 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 CACNB3P54284 484 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 ATL3Q6DD88 541 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 RCSD1Q6JBY9 416 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 ILDR2Q71H61 639 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 METTL16Q86W50 562 aaKnown RBP15.58■□□□□ 0.08
RXRB-205ENST00000483821 PNMA1Q8ND90 353 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 ALG1Q9BT22 464 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 RNF26Q9BY78 433 aaPredicted RBP15.58■□□□□ 0.08
RXRB-205ENST00000483821 STX8Q9UNK0 236 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 PCDHAC2Q9Y5I4 1007 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 GJA3Q9Y6H8 435 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 CDK5RAP2Q96SN8 1893 aa15.58■□□□□ 0.08
RXRB-205ENST00000483821 SHMT1P34896 483 aa15.57■□□□□ 0.08
RXRB-205ENST00000483821 NOVP48745 357 aa15.57■□□□□ 0.08
RXRB-205ENST00000483821 GMPSP49915 693 aaPredicted RBP15.57■□□□□ 0.08
RXRB-205ENST00000483821 CERKLQ49MI3 558 aaPredicted RBP15.57■□□□□ 0.08
RXRB-205ENST00000483821 ZFPM1Q8IX07 1006 aa15.57■□□□□ 0.08
RXRB-205ENST00000483821 FBXO18Q8NFZ0 1043 aa15.57■□□□□ 0.08
RXRB-205ENST00000483821 SLC26A6Q9BXS9 759 aa15.57■□□□□ 0.08
RXRB-205ENST00000483821 VEZTQ9HBM0 779 aa15.57■□□□□ 0.08
RXRB-205ENST00000483821 CNOT7Q9UIV1 285 aaKnown RBP15.57■□□□□ 0.08
RXRB-205ENST00000483821 DDTLA6NHG4 134 aaPredicted RBP15.56■□□□□ 0.08
RXRB-205ENST00000483821 TCP10L2B9ZVM9 353 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 PRPF3O43395 683 aaKnown RBP15.56■□□□□ 0.08
RXRB-205ENST00000483821 TTLL1O95922 423 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 SAFBQ15424 915 aaKnown RBP eCLIP15.56■□□□□ 0.08
RXRB-205ENST00000483821 TATDN1Q6P1N9 297 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 TMTC3Q6ZXV5 915 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 CDC37L1Q7L3B6 337 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 GPC2Q8N158 579 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 CSRNP1Q96S65 589 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 TMEM47Q9BQJ4 181 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 KANSL2Q9H9L4 492 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 CABP5Q9NP86 173 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 MTMR4Q9NYA4 1195 aa15.56■□□□□ 0.08
RXRB-205ENST00000483821 ECM29Q5VYK3 1845 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 CLRN2A0PK11 232 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 MPHOSPH10O00566 681 aaKnown RBP15.55■□□□□ 0.08
RXRB-205ENST00000483821 WNT10BO00744 389 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 TBC1D12O60347 775 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 KRT85P78386 507 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 GRM4Q14833 912 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 SH3BP5LQ7L8J4 393 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 BRAPQ7Z569 592 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 MICALL2Q8IY33 904 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 PHKBQ93100 1093 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 CEP95Q96GE4 821 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 ZNF396Q96N95 335 aaPredicted RBP15.55■□□□□ 0.08
RXRB-205ENST00000483821 SCAND2PQ9GZW5 306 aaPredicted RBP15.55■□□□□ 0.08
RXRB-205ENST00000483821 CFAP45Q9UL16 551 aa15.55■□□□□ 0.08
RXRB-205ENST00000483821 IGKV6D-41A0A0C4DH26 115 aa15.54■□□□□ 0.08
RXRB-205ENST00000483821 TRAK2O60296 914 aa15.54■□□□□ 0.08
RXRB-205ENST00000483821 PARP1P09874 1014 aaKnown RBP15.54■□□□□ 0.08
RXRB-205ENST00000483821 AKR1B1P15121 316 aa15.54■□□□□ 0.08
RXRB-205ENST00000483821 SMARCA1P28370 1054 aa15.54■□□□□ 0.08
RXRB-205ENST00000483821 RBM26Q5T8P6 1007 aaKnown RBP15.54■□□□□ 0.08
RXRB-205ENST00000483821 TMEM179Q6ZVK1 233 aa15.54■□□□□ 0.08
RXRB-205ENST00000483821 NBPF11Q86T75 865 aa15.54■□□□□ 0.08
RXRB-205ENST00000483821 HOOK2Q96ED9 719 aa15.54■□□□□ 0.08
RXRB-205ENST00000483821 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.54■□□□□ 0.08
RXRB-205ENST00000483821 PRPF40AO75400 957 aaKnown RBP15.53■□□□□ 0.08
RXRB-205ENST00000483821 PRELPP51888 382 aa15.53■□□□□ 0.08
RXRB-205ENST00000483821 RESTQ13127 1097 aa15.53■□□□□ 0.08
RXRB-205ENST00000483821 GNL2Q13823 731 aaKnown RBP15.53■□□□□ 0.08
RXRB-205ENST00000483821 ABCB5Q2M3G0 1257 aa15.53■□□□□ 0.08
RXRB-205ENST00000483821 FERMT3Q86UX7 667 aa15.53■□□□□ 0.08
RXRB-205ENST00000483821 FAM177A1Q8N128 213 aaPredicted RBP15.53■□□□□ 0.08
RXRB-205ENST00000483821 TMEM87AQ8NBN3 555 aa15.53■□□□□ 0.08
RXRB-205ENST00000483821 NYAP2Q9P242 653 aa15.53■□□□□ 0.08
RXRB-205ENST00000483821 SYNPO2Q9UMS6 1093 aa15.53■□□□□ 0.08
RXRB-205ENST00000483821 ADAMTSL1Q8N6G6 1762 aa15.53■□□□□ 0.08
RXRB-205ENST00000483821 DTNBO60941 627 aa15.52■□□□□ 0.08
RXRB-205ENST00000483821 MBD3O95983 291 aa15.52■□□□□ 0.08
RXRB-205ENST00000483821 KIF4BQ2VIQ3 1234 aa15.52■□□□□ 0.08
RXRB-205ENST00000483821 NBPF9Q3BBW0 867 aa15.52■□□□□ 0.08
RXRB-205ENST00000483821 ASPRV1Q53RT3 343 aa15.52■□□□□ 0.08
RXRB-205ENST00000483821 KRT40Q6A162 431 aa15.52■□□□□ 0.08
RXRB-205ENST00000483821 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.52■□□□□ 0.08
RXRB-205ENST00000483821 CLIP2Q9UDT6 1046 aa15.52■□□□□ 0.08
RXRB-205ENST00000483821 V9GY48 417 aaPredicted RBP15.52■□□□□ 0.08
RXRB-205ENST00000483821 CNTNAP1P78357 1384 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 ZNF541Q9H0D2 1346 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 PALM3A6NDB9 673 aaPredicted RBP15.51■□□□□ 0.07
RXRB-205ENST00000483821 PPFIA3O75145 1194 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 LMOD1P29536 600 aaPredicted RBP15.51■□□□□ 0.07
RXRB-205ENST00000483821 FOSBP53539 338 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 DNM1Q05193 864 aaKnown RBP15.51■□□□□ 0.07
RXRB-205ENST00000483821 FUT2Q10981 343 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 APOBEC3FQ8IUX4 373 aaKnown RBP15.51■□□□□ 0.07
RXRB-205ENST00000483821 CCDC82Q8N4S0 544 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 MKL1Q969V6 931 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 BRMS1Q9HCU9 246 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 GINM1Q9NU53 330 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 LMBRD1Q9NUN5 540 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 GPRC5DQ9NZD1 345 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 RNF181Q9P0P0 153 aa15.51■□□□□ 0.07
RXRB-205ENST00000483821 DDX49Q9Y6V7 483 aaKnown RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms