RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 CTU1Q7Z7A3 348 aaKnown RBP30.78■■■□□ 2.52
PDCD4-208ENST00000483670 PDE4BQ07343 736 aa30.77■■■□□ 2.52
PDCD4-208ENST00000483670 SEPT2Q15019 361 aa30.77■■■□□ 2.52
PDCD4-208ENST00000483670 KIAA1683Q9H0B3 1180 aa30.77■■■□□ 2.52
PDCD4-208ENST00000483670 GUCY1A2P33402 732 aa30.76■■■□□ 2.51
PDCD4-208ENST00000483670 PPARAQ07869 468 aa30.76■■■□□ 2.51
PDCD4-208ENST00000483670 CWC27Q6UX04 472 aaKnown RBP30.76■■■□□ 2.51
PDCD4-208ENST00000483670 C12orf42Q96LP6 360 aa30.76■■■□□ 2.51
PDCD4-208ENST00000483670 SH2D4AQ9H788 454 aa30.76■■■□□ 2.51
PDCD4-208ENST00000483670 HSPD1P10809 573 aaKnown RBP30.75■■■□□ 2.51
PDCD4-208ENST00000483670 AKR1B1P15121 316 aa30.75■■■□□ 2.51
PDCD4-208ENST00000483670 OSBPP22059 807 aa30.75■■■□□ 2.51
PDCD4-208ENST00000483670 PKN2Q16513 984 aaKnown RBP30.75■■■□□ 2.51
PDCD4-208ENST00000483670 TREML2Q5T2D2 321 aa30.75■■■□□ 2.51
PDCD4-208ENST00000483670 ARHGEF10LQ9HCE6 1279 aa30.75■■■□□ 2.51
PDCD4-208ENST00000483670 SMIM22K7EJ46 135 aa30.74■■■□□ 2.51
PDCD4-208ENST00000483670 FOXP2O15409 715 aa30.74■■■□□ 2.51
PDCD4-208ENST00000483670 HOXA7P31268 230 aaPredicted RBP30.74■■■□□ 2.51
PDCD4-208ENST00000483670 VPS53Q5VIR6 699 aa30.74■■■□□ 2.51
PDCD4-208ENST00000483670 C17orf99Q6UX52 265 aa30.74■■■□□ 2.51
PDCD4-208ENST00000483670 ZNF589Q86UQ0 364 aaPredicted RBP30.74■■■□□ 2.51
PDCD4-208ENST00000483670 ZNF444Q8N0Y2 327 aaPredicted RBP30.74■■■□□ 2.51
PDCD4-208ENST00000483670 SMCR8Q8TEV9 937 aaPredicted RBP30.74■■■□□ 2.51
PDCD4-208ENST00000483670 KANSL2Q9H9L4 492 aa30.74■■■□□ 2.51
PDCD4-208ENST00000483670 ADGRA2Q96PE1 1338 aa30.73■■■□□ 2.51
PDCD4-208ENST00000483670 ICA1Q05084 483 aa30.73■■■□□ 2.51
PDCD4-208ENST00000483670 DGKZQ13574 1117 aa30.73■■■□□ 2.51
PDCD4-208ENST00000483670 RUFY2Q8WXA3 655 aa30.73■■■□□ 2.51
PDCD4-208ENST00000483670 ANAPC4Q9UJX5 808 aa30.73■■■□□ 2.51
PDCD4-208ENST00000483670 CYP2C8P10632 490 aa30.72■■■□□ 2.51
PDCD4-208ENST00000483670 RASA1P20936 1047 aa30.72■■■□□ 2.51
PDCD4-208ENST00000483670 KIF22Q14807 665 aa30.72■■■□□ 2.51
PDCD4-208ENST00000483670 EMILIN3Q9NT22 766 aa30.72■■■□□ 2.51
PDCD4-208ENST00000483670 RAD50Q92878 1312 aa30.72■■■□□ 2.51
PDCD4-208ENST00000483670 FGAP02671 866 aa30.71■■■□□ 2.51
PDCD4-208ENST00000483670 GCLCP48506 637 aaPredicted RBP30.7■■■□□ 2.51
PDCD4-208ENST00000483670 IRX3P78415 501 aaPredicted RBP30.7■■■□□ 2.51
PDCD4-208ENST00000483670 ACER1Q8TDN7 264 aa30.7■■■□□ 2.51
PDCD4-208ENST00000483670 CPA4Q9UI42 421 aa30.7■■■□□ 2.51
PDCD4-208ENST00000483670 GREB1LQ9C091 1923 aaPredicted RBP30.7■■■□□ 2.51
PDCD4-208ENST00000483670 MCOLN1Q9GZU1 580 aa30.69■■■□□ 2.5
PDCD4-208ENST00000483670 ASCC2Q9H1I8 757 aaPredicted RBP30.69■■■□□ 2.5
PDCD4-208ENST00000483670 GNRH1P01148 92 aa30.68■■■□□ 2.5
PDCD4-208ENST00000483670 BCRP11274 1271 aa30.68■■■□□ 2.5
PDCD4-208ENST00000483670 STK11IPQ8N1F8 1099 aa30.68■■■□□ 2.5
PDCD4-208ENST00000483670 CD99L2Q8TCZ2 262 aa30.68■■■□□ 2.5
PDCD4-208ENST00000483670 GTF3C2Q8WUA4 911 aaPredicted RBP30.68■■■□□ 2.5
PDCD4-208ENST00000483670 LPAR1Q92633 364 aa30.68■■■□□ 2.5
PDCD4-208ENST00000483670 DSCC1Q9BVC3 393 aa30.68■■■□□ 2.5
PDCD4-208ENST00000483670 TMX2Q9Y320 296 aa30.68■■■□□ 2.5
PDCD4-208ENST00000483670 PCP11498 1178 aaKnown RBP30.67■■■□□ 2.5
PDCD4-208ENST00000483670 LACTBP83111 547 aaPredicted RBP30.67■■■□□ 2.5
PDCD4-208ENST00000483670 ZYXQ15942 572 aaKnown RBP30.67■■■□□ 2.5
PDCD4-208ENST00000483670 PPP4R3BQ5MIZ7 849 aa30.67■■■□□ 2.5
PDCD4-208ENST00000483670 EFCC1Q9HA90 598 aa30.67■■■□□ 2.5
PDCD4-208ENST00000483670 A0A1W2PRG0 241 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L15C9J2P7 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L13C9JLJ4 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L11C9JVI0 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L18D6R9N7 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L22D6RA61 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L17D6RBQ6 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L19D6RCP7 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L20D6RJB6 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 VCAM1P19320 739 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 CHMLP26374 656 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 USP17L24Q0WX57 530 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 TRIM17Q9Y577 477 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 PLIN4Q96Q06 1357 aa30.66■■■□□ 2.5
PDCD4-208ENST00000483670 PRDM1O75626 825 aa30.65■■■□□ 2.5
PDCD4-208ENST00000483670 TSPY3P0CV98 308 aa30.65■■■□□ 2.5
PDCD4-208ENST00000483670 TSPY8P0CW00 308 aa30.65■■■□□ 2.5
PDCD4-208ENST00000483670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.65■■■□□ 2.5
PDCD4-208ENST00000483670 EEF2P13639 858 aaKnown RBP30.64■■■□□ 2.5
PDCD4-208ENST00000483670 NT5C2P49902 561 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 FAM110CQ1W6H9 321 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 BMP2KLQ5H9B9 411 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 OTOP1Q7RTM1 612 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 SIAH1Q8IUQ4 282 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 NEDD1Q8NHV4 660 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.64■■■□□ 2.5
PDCD4-208ENST00000483670 PPP4R2Q9NY27 417 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 NYAP2Q9P242 653 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 CTNNA3Q9UI47 895 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 SYNPO2Q9UMS6 1093 aa30.64■■■□□ 2.5
PDCD4-208ENST00000483670 ORC4O43929 436 aa30.63■■■□□ 2.49
PDCD4-208ENST00000483670 FGRP09769 529 aa30.63■■■□□ 2.49
PDCD4-208ENST00000483670 CTDSPL2Q05D32 466 aa30.63■■■□□ 2.49
PDCD4-208ENST00000483670 FBXO46Q6PJ61 603 aaPredicted RBP30.63■■■□□ 2.49
PDCD4-208ENST00000483670 VCPKMTQ9H867 229 aa30.63■■■□□ 2.49
PDCD4-208ENST00000483670 GOPCQ9HD26 462 aa30.63■■■□□ 2.49
PDCD4-208ENST00000483670 ATP2B2Q01814 1243 aa30.62■■■□□ 2.49
PDCD4-208ENST00000483670 CATSPERGQ6ZRH7 1159 aa30.62■■■□□ 2.49
PDCD4-208ENST00000483670 RNF41Q9H4P4 317 aaPredicted RBP30.62■■■□□ 2.49
PDCD4-208ENST00000483670 LAMA4Q16363 1823 aa30.61■■■□□ 2.49
PDCD4-208ENST00000483670 IGKV6D-41A0A0C4DH26 115 aa30.61■■■□□ 2.49
PDCD4-208ENST00000483670 ZNF213O14771 459 aa30.61■■■□□ 2.49
PDCD4-208ENST00000483670 PRMT2P55345 433 aa30.61■■■□□ 2.49
PDCD4-208ENST00000483670 HERVK_113P62684 666 aa30.61■■■□□ 2.49
PDCD4-208ENST00000483670 TFAP4Q01664 338 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms