RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 EMILIN3Q9NT22 766 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 SERPINB13Q9UIV8 391 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 GABRQQ9UN88 632 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 TACC3Q9Y6A5 838 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 ATAD5Q96QE3 1844 aa11.5□□□□□ -0.57
HMG20B-210ENST00000483417 LOC285556D6RIA3 1793 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 BRCA2P51587 3418 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 USP17L10C9JJH3 530 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 USP17L12C9JPN9 530 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 USP17L21D6R901 530 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 SHMT1P34896 483 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
HMG20B-210ENST00000483417 PRKCZQ05513 592 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 MTMR2Q13614 643 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 CTR9Q6PD62 1173 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 POTEEQ6S8J3 1075 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 IFNL3Q8IZI9 196 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 ANKRD13CQ8N6S4 541 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 SMCR8Q8TEV9 937 aaPredicted RBP11.49□□□□□ -0.57
HMG20B-210ENST00000483417 ASCC2Q9H1I8 757 aaPredicted RBP11.49□□□□□ -0.57
HMG20B-210ENST00000483417 EPB41L4AQ9HCS5 686 aaPredicted RBP11.49□□□□□ -0.57
HMG20B-210ENST00000483417 DIAPH3Q9NSV4 1193 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 PNMA3Q9UL41 463 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 MYPNQ86TC9 1320 aa11.49□□□□□ -0.57
HMG20B-210ENST00000483417 MYH1P12882 1939 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 MYH7P12883 1935 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 GH2P01242 217 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 FGAP02671 866 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 APPP05067 770 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 HSPD1P10809 573 aaKnown RBP11.48□□□□□ -0.57
HMG20B-210ENST00000483417 GRK4P32298 578 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 GUCY1A2P33402 732 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 FLT3LGP49771 235 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 PABPC4Q13310 644 aaKnown RBP eCLIP11.48□□□□□ -0.57
HMG20B-210ENST00000483417 IRF5Q13568 498 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 MTFR1Q15390 333 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 FAM110CQ1W6H9 321 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 STK11IPQ8N1F8 1099 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 NKX2-3Q8TAU0 364 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 DYNLL2Q96FJ2 89 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 C12orf42Q96LP6 360 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 P2RX7Q99572 595 aaKnown RBP11.48□□□□□ -0.57
HMG20B-210ENST00000483417 TMEM106CQ9BVX2 250 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 CRNKL1Q9BZJ0 848 aaKnown RBP11.48□□□□□ -0.57
HMG20B-210ENST00000483417 MCM9Q9NXL9 1143 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 MORF4L1Q9UBU8 362 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 GJD2Q9UKL4 321 aa11.48□□□□□ -0.57
HMG20B-210ENST00000483417 MGAMO43451 1857 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 DDX60LQ5H9U9 1706 aaKnown RBP11.47□□□□□ -0.57
HMG20B-210ENST00000483417 SGSM2O43147 1006 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 SEC24BO95487 1268 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 LRRFIP1Q32MZ4 808 aaKnown RBP11.47□□□□□ -0.57
HMG20B-210ENST00000483417 CERKLQ49MI3 558 aaPredicted RBP11.47□□□□□ -0.57
HMG20B-210ENST00000483417 TICAM2Q86XR7 235 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 RAET1EQ8TD07 263 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 PXYLP1Q8TE99 480 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 ESYT1Q9BSJ8 1104 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 TRIM34Q9BYJ4 488 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 ATP8A2Q9NTI2 1148 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 RBPJLQ9UBG7 517 aa11.47□□□□□ -0.57
HMG20B-210ENST00000483417 MKI67P46013 3256 aaKnown RBP11.46□□□□□ -0.57
HMG20B-210ENST00000483417 CCDC171Q6TFL3 1326 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 MINDY4BA8MYZ0 360 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 HIP1O00291 1037 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 TNPO2O14787 897 aaKnown RBP11.46□□□□□ -0.57
HMG20B-210ENST00000483417 PEX10O60683 326 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 MYCP01106 439 aaPredicted RBP11.46□□□□□ -0.57
HMG20B-210ENST00000483417 POLR3DP05423 398 aaPredicted RBP11.46□□□□□ -0.57
HMG20B-210ENST00000483417 ABCB5Q2M3G0 1257 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 Q3C1V9 767 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 C12orf60Q5U649 245 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 PRPF38BQ5VTL8 546 aaKnown RBP11.46□□□□□ -0.57
HMG20B-210ENST00000483417 USP17L2Q6R6M4 530 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 SIAH1Q8IUQ4 282 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 SLC44A5Q8NCS7 719 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 ACER1Q8TDN7 264 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 KIAA1683Q9H0B3 1180 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 TXNRD2Q9NNW7 524 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 TMOD4Q9NZQ9 345 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 TAOK2Q9UL54 1235 aa11.46□□□□□ -0.57
HMG20B-210ENST00000483417 ADCY3O60266 1144 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 CDC45O75419 566 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 GJB1P08034 283 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 HERVK_113P62684 666 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 CTDSPL2Q05D32 466 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 ALX1Q15699 326 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 SHISA4Q96DD7 197 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
HMG20B-210ENST00000483417 TAF6LQ9Y6J9 622 aa11.45□□□□□ -0.58
HMG20B-210ENST00000483417 BAZ2AQ9UIF9 1905 aaKnown RBP11.45□□□□□ -0.58
HMG20B-210ENST00000483417 A0A1W2PRG0 241 aa11.44□□□□□ -0.58
HMG20B-210ENST00000483417 CCL5P13501 91 aa11.44□□□□□ -0.58
HMG20B-210ENST00000483417 ELNP15502 786 aa11.44□□□□□ -0.58
HMG20B-210ENST00000483417 GNAT2P19087 354 aa11.44□□□□□ -0.58
HMG20B-210ENST00000483417 GJA8P48165 433 aa11.44□□□□□ -0.58
HMG20B-210ENST00000483417 HAND2P61296 217 aa11.44□□□□□ -0.58
HMG20B-210ENST00000483417 SEPT2Q15019 361 aa11.44□□□□□ -0.58
HMG20B-210ENST00000483417 RAB3GAP1Q15042 981 aa11.44□□□□□ -0.58
HMG20B-210ENST00000483417 SBK1Q52WX2 424 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms