RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 PPP2R5EQ16537 467 aa8.83□□□□□ -1
SF3B1-210ENST00000482158 SOGA3Q5TF21 947 aa8.83□□□□□ -1
SF3B1-210ENST00000482158 TMEM192Q8IY95 271 aa8.83□□□□□ -1
SF3B1-210ENST00000482158 PHACTR4Q8IZ21 702 aa8.83□□□□□ -1
SF3B1-210ENST00000482158 DNAJB8Q8NHS0 232 aa8.83□□□□□ -1
SF3B1-210ENST00000482158 CCDC74BQ96LY2 380 aa8.83□□□□□ -1
SF3B1-210ENST00000482158 C7orf69Q9H7B7 122 aa8.83□□□□□ -1
SF3B1-210ENST00000482158 FAM86C2PA6NEL3 165 aa8.82□□□□□ -1
SF3B1-210ENST00000482158 ADMP35318 185 aa8.82□□□□□ -1
SF3B1-210ENST00000482158 CCDC144BQ3MJ40 725 aa8.82□□□□□ -1
SF3B1-210ENST00000482158 PAOXQ6QHF9 649 aa8.82□□□□□ -1
SF3B1-210ENST00000482158 PRR23CQ6ZRP0 262 aa8.82□□□□□ -1
SF3B1-210ENST00000482158 PRDM10Q9NQV6 1147 aa8.82□□□□□ -1
SF3B1-210ENST00000482158 RAXQ9Y2V3 346 aa8.82□□□□□ -1
SF3B1-210ENST00000482158 LEFTY1O75610 366 aa8.81□□□□□ -1
SF3B1-210ENST00000482158 CCNFP41002 786 aa8.81□□□□□ -1
SF3B1-210ENST00000482158 CNTNAP4Q9C0A0 1308 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 EOMESO95936 686 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 PROCP04070 461 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 LETMD1Q6P1Q0 360 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 FAM214BQ7L5A3 538 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 TOP6BLQ8N6T0 577 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 VWCEQ96DN2 955 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 MIPEPQ99797 713 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 DUSP23Q9BVJ7 150 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 OSBPL2Q9H1P3 480 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 PIF1Q9H611 641 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 STOML1Q9UBI4 398 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 CEP131Q9UPN4 1083 aa8.8□□□□□ -1
SF3B1-210ENST00000482158 LOC105371045A0A1W2PR82 267 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 DDR2Q16832 855 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 LARP1BQ659C4 914 aaKnown RBP8.79□□□□□ -1
SF3B1-210ENST00000482158 CDH24Q86UP0 819 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 PPFIBP1Q86W92 1011 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 KLHL6Q8WZ60 621 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 SLC6A18Q96N87 628 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 TRIM55Q9BYV6 548 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 ST7Q9NRC1 585 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 ZNF214Q9UL59 606 aaPredicted RBP8.79□□□□□ -1
SF3B1-210ENST00000482158 PCDHB10Q9UN67 800 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 MSRB2Q9Y3D2 182 aa8.79□□□□□ -1
SF3B1-210ENST00000482158 B2RBV5 119 aa8.78□□□□□ -1
SF3B1-210ENST00000482158 GBP1P32455 592 aa8.78□□□□□ -1
SF3B1-210ENST00000482158 DOC2BQ14184 412 aa8.78□□□□□ -1
SF3B1-210ENST00000482158 SIRPGQ9P1W8 387 aa8.78□□□□□ -1
SF3B1-210ENST00000482158 R3HCC1Q9Y3T6 440 aaKnown RBP8.78□□□□□ -1
SF3B1-210ENST00000482158 SLC12A7Q9Y666 1083 aa8.78□□□□□ -1
SF3B1-210ENST00000482158 GJB6O95452 261 aa8.77□□□□□ -1.01
SF3B1-210ENST00000482158 FAM87AP0C7U9 286 aa8.77□□□□□ -1.01
SF3B1-210ENST00000482158 FXNQ16595 210 aa8.77□□□□□ -1.01
SF3B1-210ENST00000482158 C6orf15Q6UXA7 325 aaPredicted RBP8.77□□□□□ -1.01
SF3B1-210ENST00000482158 ZAR1Q86SH2 424 aa8.77□□□□□ -1.01
SF3B1-210ENST00000482158 PHAXQ9H814 394 aaKnown RBP8.77□□□□□ -1.01
SF3B1-210ENST00000482158 SUCOQ9UBS9 1254 aaKnown RBP8.77□□□□□ -1.01
SF3B1-210ENST00000482158 C9IYK1 514 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 PMS1P54277 932 aaKnown RBP8.76□□□□□ -1.01
SF3B1-210ENST00000482158 NKAPLQ5M9Q1 402 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 RNF43Q68DV7 783 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 MRM1Q6IN84 353 aaKnown RBP8.76□□□□□ -1.01
SF3B1-210ENST00000482158 OGFOD3Q6PK18 319 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 MKL1Q969V6 931 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 TBC1D32Q96NH3 1257 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 SPOCK3Q9BQ16 436 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.76□□□□□ -1.01
SF3B1-210ENST00000482158 ZSWIM4Q9H7M6 989 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 MAPK8IP1Q9UQF2 711 aa8.76□□□□□ -1.01
SF3B1-210ENST00000482158 FAM221BA6H8Z2 402 aa8.75□□□□□ -1.01
SF3B1-210ENST00000482158 FAM170BA6NMN3 283 aa8.75□□□□□ -1.01
SF3B1-210ENST00000482158 K7ELQ4 463 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-210ENST00000482158 RASA3Q14644 834 aa8.75□□□□□ -1.01
SF3B1-210ENST00000482158 RSPO4Q2I0M5 234 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-210ENST00000482158 FAM178BQ8IXR5 827 aa8.75□□□□□ -1.01
SF3B1-210ENST00000482158 ZNF512BQ96KM6 892 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-210ENST00000482158 MFSD14AQ96MC6 490 aa8.75□□□□□ -1.01
SF3B1-210ENST00000482158 HEXIM2Q96MH2 286 aaKnown RBP8.75□□□□□ -1.01
SF3B1-210ENST00000482158 KREMEN1Q96MU8 473 aa8.75□□□□□ -1.01
SF3B1-210ENST00000482158 CDK11AQ9UQ88 783 aaPredicted RBP8.75□□□□□ -1.01
SF3B1-210ENST00000482158 CLEC3AO75596 197 aa8.74□□□□□ -1.01
SF3B1-210ENST00000482158 F13BP05160 661 aa8.74□□□□□ -1.01
SF3B1-210ENST00000482158 H2AFB1P0C5Y9 115 aa8.74□□□□□ -1.01
SF3B1-210ENST00000482158 H2AFB2P0C5Z0 115 aa8.74□□□□□ -1.01
SF3B1-210ENST00000482158 BMS1Q14692 1282 aaKnown RBP8.74□□□□□ -1.01
SF3B1-210ENST00000482158 NBPF12Q5TAG4 269 aaPredicted RBP8.74□□□□□ -1.01
SF3B1-210ENST00000482158 VHLLQ6RSH7 139 aa8.74□□□□□ -1.01
SF3B1-210ENST00000482158 DHRS1Q96LJ7 313 aa8.74□□□□□ -1.01
SF3B1-210ENST00000482158 SNTG2Q9NY99 539 aa8.74□□□□□ -1.01
SF3B1-210ENST00000482158 U2SURPO15042 1029 aaKnown RBP8.73□□□□□ -1.01
SF3B1-210ENST00000482158 DDAH1O94760 285 aa8.73□□□□□ -1.01
SF3B1-210ENST00000482158 SLC7A5Q01650 507 aa8.73□□□□□ -1.01
SF3B1-210ENST00000482158 NFIAQ12857 509 aa8.73□□□□□ -1.01
SF3B1-210ENST00000482158 GNPTABQ3T906 1256 aa8.73□□□□□ -1.01
SF3B1-210ENST00000482158 AXDND1Q5T1B0 1012 aaPredicted RBP8.73□□□□□ -1.01
SF3B1-210ENST00000482158 TDRD10Q5VZ19 366 aaKnown RBP8.73□□□□□ -1.01
SF3B1-210ENST00000482158 ZNF765Q7L2R6 523 aa8.73□□□□□ -1.01
SF3B1-210ENST00000482158 CCDC113Q9H0I3 377 aa8.73□□□□□ -1.01
SF3B1-210ENST00000482158 U3KQE9 123 aa8.73□□□□□ -1.01
SF3B1-210ENST00000482158 LRRN2O75325 713 aa8.72□□□□□ -1.01
SF3B1-210ENST00000482158 ETV3P41162 512 aa8.72□□□□□ -1.01
SF3B1-210ENST00000482158 KIAA1211LQ6NV74 962 aa8.72□□□□□ -1.01
SF3B1-210ENST00000482158 FBXL6Q8N531 539 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms