RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 HSPA1BP0DMV9 641 aaKnown RBP29.64■■■□□ 2.34
PERM1-203ENST00000479361 ICA1Q05084 483 aa29.64■■■□□ 2.34
PERM1-203ENST00000479361 MTMR2Q13614 643 aa29.64■■■□□ 2.34
PERM1-203ENST00000479361 ZCCHC17Q9NP64 241 aaKnown RBP29.64■■■□□ 2.34
PERM1-203ENST00000479361 TOMM22Q9NS69 142 aa29.64■■■□□ 2.34
PERM1-203ENST00000479361 RNF186Q9NXI6 227 aa29.64■■■□□ 2.34
PERM1-203ENST00000479361 TSPY3P0CV98 308 aa29.63■■■□□ 2.33
PERM1-203ENST00000479361 TSPY8P0CW00 308 aa29.63■■■□□ 2.33
PERM1-203ENST00000479361 NT5C2P49902 561 aa29.63■■■□□ 2.33
PERM1-203ENST00000479361 SH3D19Q5HYK7 790 aa29.63■■■□□ 2.33
PERM1-203ENST00000479361 GADL1Q6ZQY3 521 aa29.63■■■□□ 2.33
PERM1-203ENST00000479361 PROCA1Q8NCQ7 364 aaPredicted RBP29.63■■■□□ 2.33
PERM1-203ENST00000479361 LSG1Q9H089 658 aaKnown RBP29.63■■■□□ 2.33
PERM1-203ENST00000479361 ARHGEF10LQ9HCE6 1279 aa29.63■■■□□ 2.33
PERM1-203ENST00000479361 TMOD4Q9NZQ9 345 aa29.63■■■□□ 2.33
PERM1-203ENST00000479361 GTF3C3Q9Y5Q9 886 aa29.63■■■□□ 2.33
PERM1-203ENST00000479361 BTBD19C9JJ37 291 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 TRPA1O75762 1119 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 USP14P54578 494 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 HMGCS2P54868 508 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 TFAP4Q01664 338 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 ANKRD23Q86SG2 305 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 TBC1D10CQ8IV04 446 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 NBPF3Q9H094 633 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 KIAA1683Q9H0B3 1180 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 SH2D4AQ9H788 454 aa29.62■■■□□ 2.33
PERM1-203ENST00000479361 TSPY2A6NKD2 308 aa29.61■■■□□ 2.33
PERM1-203ENST00000479361 RANBP6O60518 1105 aaKnown RBP29.61■■■□□ 2.33
PERM1-203ENST00000479361 MOGSQ13724 837 aa29.61■■■□□ 2.33
PERM1-203ENST00000479361 RRP12Q5JTH9 1297 aaKnown RBP29.61■■■□□ 2.33
PERM1-203ENST00000479361 NEDD1Q8NHV4 660 aa29.61■■■□□ 2.33
PERM1-203ENST00000479361 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.61■■■□□ 2.33
PERM1-203ENST00000479361 INCENPQ9NQS7 918 aa29.61■■■□□ 2.33
PERM1-203ENST00000479361 RBM8AQ9Y5S9 174 aaKnown RBP29.61■■■□□ 2.33
PERM1-203ENST00000479361 LAMA4Q16363 1823 aa29.61■■■□□ 2.33
PERM1-203ENST00000479361 PLIN4Q96Q06 1357 aa29.61■■■□□ 2.33
PERM1-203ENST00000479361 FAM47AQ5JRC9 791 aa29.6■■■□□ 2.33
PERM1-203ENST00000479361 PPP4R3BQ5MIZ7 849 aa29.6■■■□□ 2.33
PERM1-203ENST00000479361 USP17L2Q6R6M4 530 aa29.6■■■□□ 2.33
PERM1-203ENST00000479361 FAM43AQ8N2R8 423 aa29.6■■■□□ 2.33
PERM1-203ENST00000479361 ACER1Q8TDN7 264 aa29.6■■■□□ 2.33
PERM1-203ENST00000479361 AGTPBP1Q9UPW5 1226 aa29.59■■■□□ 2.33
PERM1-203ENST00000479361 TACC3Q9Y6A5 838 aa29.59■■■□□ 2.33
PERM1-203ENST00000479361 ATP2B2Q01814 1243 aa29.58■■■□□ 2.33
PERM1-203ENST00000479361 ESR2Q92731 530 aa29.58■■■□□ 2.33
PERM1-203ENST00000479361 CFHR5Q9BXR6 569 aa29.58■■■□□ 2.33
PERM1-203ENST00000479361 CNNM2Q9H8M5 875 aa29.58■■■□□ 2.33
PERM1-203ENST00000479361 SLC45A1Q9Y2W3 748 aa29.58■■■□□ 2.33
PERM1-203ENST00000479361 PTPRFP10586 1907 aa29.57■■■□□ 2.32
PERM1-203ENST00000479361 IGKV6D-41A0A0C4DH26 115 aa29.57■■■□□ 2.32
PERM1-203ENST00000479361 PDHXO00330 501 aa29.57■■■□□ 2.32
PERM1-203ENST00000479361 EEF2P13639 858 aaKnown RBP29.57■■■□□ 2.32
PERM1-203ENST00000479361 PABPC4Q13310 644 aaKnown RBP eCLIP29.57■■■□□ 2.32
PERM1-203ENST00000479361 GPAT2Q6NUI2 795 aa29.57■■■□□ 2.32
PERM1-203ENST00000479361 CLEC10AQ8IUN9 316 aa29.57■■■□□ 2.32
PERM1-203ENST00000479361 NYAP2Q9P242 653 aa29.57■■■□□ 2.32
PERM1-203ENST00000479361 TMX2Q9Y320 296 aa29.57■■■□□ 2.32
PERM1-203ENST00000479361 A0A1W2PRG0 241 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 FOXN1O15353 648 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 REC8O95072 547 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 CYP21A2P08686 494 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 CTCFP49711 727 aaPredicted RBP29.56■■■□□ 2.32
PERM1-203ENST00000479361 TAF1CQ15572 869 aaPredicted RBP29.56■■■□□ 2.32
PERM1-203ENST00000479361 ZYXQ15942 572 aaKnown RBP29.56■■■□□ 2.32
PERM1-203ENST00000479361 SIAH1Q8IUQ4 282 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 CEP95Q96GE4 821 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 C12orf42Q96LP6 360 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 KRT23Q9C075 422 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 MTMR4Q9NYA4 1195 aa29.56■■■□□ 2.32
PERM1-203ENST00000479361 GREB1LQ9C091 1923 aaPredicted RBP29.55■■■□□ 2.32
PERM1-203ENST00000479361 NEDD4P46934 1319 aa29.55■■■□□ 2.32
PERM1-203ENST00000479361 TTLL1O95922 423 aa29.55■■■□□ 2.32
PERM1-203ENST00000479361 TRDNQ13061 729 aa29.55■■■□□ 2.32
PERM1-203ENST00000479361 ZFYVE28Q9HCC9 887 aa29.55■■■□□ 2.32
PERM1-203ENST00000479361 EMILIN3Q9NT22 766 aa29.55■■■□□ 2.32
PERM1-203ENST00000479361 TREML2Q5T2D2 321 aa29.54■■■□□ 2.32
PERM1-203ENST00000479361 PNMA3Q9UL41 463 aa29.54■■■□□ 2.32
PERM1-203ENST00000479361 LOC285556D6RIA3 1793 aa29.54■■■□□ 2.32
PERM1-203ENST00000479361 TBC1D8O95759 1140 aa29.53■■■□□ 2.32
PERM1-203ENST00000479361 DGKZQ13574 1117 aa29.53■■■□□ 2.32
PERM1-203ENST00000479361 RNF20Q5VTR2 975 aa29.53■■■□□ 2.32
PERM1-203ENST00000479361 LPAR1Q92633 364 aa29.53■■■□□ 2.32
PERM1-203ENST00000479361 PARK7Q99497 189 aaKnown RBP29.53■■■□□ 2.32
PERM1-203ENST00000479361 GOPCQ9HD26 462 aa29.53■■■□□ 2.32
PERM1-203ENST00000479361 CLIP2Q9UDT6 1046 aa29.53■■■□□ 2.32
PERM1-203ENST00000479361 SYNPO2Q9UMS6 1093 aa29.53■■■□□ 2.32
PERM1-203ENST00000479361 CRHR2Q13324 411 aa29.52■■■□□ 2.32
PERM1-203ENST00000479361 NECTIN1Q15223 517 aa29.52■■■□□ 2.32
PERM1-203ENST00000479361 VCPKMTQ9H867 229 aa29.52■■■□□ 2.32
PERM1-203ENST00000479361 TCP11L1Q9NUJ3 509 aa29.52■■■□□ 2.32
PERM1-203ENST00000479361 TSKSQ9UJT2 592 aa29.52■■■□□ 2.32
PERM1-203ENST00000479361 B4E1Z4 1266 aa29.51■■■□□ 2.31
PERM1-203ENST00000479361 KDM4AO75164 1064 aa29.51■■■□□ 2.31
PERM1-203ENST00000479361 OSBPP22059 807 aa29.51■■■□□ 2.31
PERM1-203ENST00000479361 IQCA1Q86XH1 822 aa29.51■■■□□ 2.31
PERM1-203ENST00000479361 MKL1Q969V6 931 aa29.51■■■□□ 2.31
PERM1-203ENST00000479361 IL17RBQ9NRM6 502 aa29.51■■■□□ 2.31
PERM1-203ENST00000479361 STX8Q9UNK0 236 aa29.51■■■□□ 2.31
PERM1-203ENST00000479361 SLC27A2O14975 620 aa29.5■■■□□ 2.31
PERM1-203ENST00000479361 HSPA8P11142 646 aaKnown RBP29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms