RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 BEGAINQ9BUH8 593 aa16.55■□□□□ 0.24
PCIF1-202ENST00000479348 NBPF3Q9H094 633 aa16.55■□□□□ 0.24
PCIF1-202ENST00000479348 KIAA1683Q9H0B3 1180 aa16.55■□□□□ 0.24
PCIF1-202ENST00000479348 CNNM2Q9H8M5 875 aa16.55■□□□□ 0.24
PCIF1-202ENST00000479348 ZCCHC17Q9NP64 241 aaKnown RBP16.55■□□□□ 0.24
PCIF1-202ENST00000479348 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.55■□□□□ 0.24
PCIF1-202ENST00000479348 PLIN4Q96Q06 1357 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 TSPY2A6NKD2 308 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 CA12O43570 354 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 USP14P54578 494 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 TFAP4Q01664 338 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 ICA1Q05084 483 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 IFNL1Q8IU54 200 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 TBC1D10CQ8IV04 446 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 PROCA1Q8NCQ7 364 aaPredicted RBP16.54■□□□□ 0.24
PCIF1-202ENST00000479348 BRI3BPQ8WY22 251 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 ESR2Q92731 530 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 KRT23Q9C075 422 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 SH2D4AQ9H788 454 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 ARHGEF10LQ9HCE6 1279 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 TOMM22Q9NS69 142 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 WBP1LQ9NX94 342 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 LAMA4Q16363 1823 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
PCIF1-202ENST00000479348 IGKV6D-41A0A0C4DH26 115 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 RANBP6O60518 1105 aaKnown RBP16.53■□□□□ 0.24
PCIF1-202ENST00000479348 CYP21A2P08686 494 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 NECTIN1Q15223 517 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 RNF20Q5VTR2 975 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 ANKRD23Q86SG2 305 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCIF1-202ENST00000479348 INCENPQ9NQS7 918 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 NYAP2Q9P242 653 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 SYNPO2Q9UMS6 1093 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 TACC3Q9Y6A5 838 aa16.53■□□□□ 0.24
PCIF1-202ENST00000479348 TRDNQ13061 729 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 MTMR2Q13614 643 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 MOGSQ13724 837 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.24
PCIF1-202ENST00000479348 USP17L2Q6R6M4 530 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 FEZ1Q99689 392 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 TCP11L1Q9NUJ3 509 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 SAGE1Q9NXZ1 904 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 TMOD4Q9NZQ9 345 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 SLC45A1Q9Y2W3 748 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 TMX2Q9Y320 296 aa16.52■□□□□ 0.24
PCIF1-202ENST00000479348 HMGCS2P54868 508 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 CCDC178Q5BJE1 867 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 FAM47AQ5JRC9 791 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 GADL1Q6ZQY3 521 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 SIAH1Q8IUQ4 282 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 ACER1Q8TDN7 264 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 C12orf42Q96LP6 360 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 PTPN18Q99952 460 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 CFHR5Q9BXR6 569 aa16.51■□□□□ 0.23
PCIF1-202ENST00000479348 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
PCIF1-202ENST00000479348 BTBD19C9JJ37 291 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 IGF2BP3O00425 579 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCIF1-202ENST00000479348 SLC27A2O14975 620 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 TTLL1O95922 423 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 EEF2P13639 858 aaKnown RBP16.5■□□□□ 0.23
PCIF1-202ENST00000479348 PABPC4Q13310 644 aaKnown RBP eCLIP16.5■□□□□ 0.23
PCIF1-202ENST00000479348 CREB3L3Q68CJ9 461 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 GPAT2Q6NUI2 795 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 MKL1Q969V6 931 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 CEP95Q96GE4 821 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 TTC14Q96N46 770 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 RNF186Q9NXI6 227 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 AGTPBP1Q9UPW5 1226 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 NEDD4P46934 1319 aa16.5■□□□□ 0.23
PCIF1-202ENST00000479348 A0A1W2PRG0 241 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 E7EWF7 191 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 ZKSCAN1P17029 563 aaPredicted RBP16.49■□□□□ 0.23
PCIF1-202ENST00000479348 NOVP48745 357 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 TSGA10IPQ3SY00 556 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 IQCA1Q86XH1 822 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 FAM43AQ8N2R8 423 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 NCOA7Q8NI08 942 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 LPAR1Q92633 364 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 GOPCQ9HD26 462 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 EMILIN3Q9NT22 766 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 CLIP2Q9UDT6 1046 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 PTPRFP10586 1907 aa16.49■□□□□ 0.23
PCIF1-202ENST00000479348 B4E1Z4 1266 aa16.48■□□□□ 0.23
PCIF1-202ENST00000479348 PDHXO00330 501 aa16.48■□□□□ 0.23
PCIF1-202ENST00000479348 KDM4AO75164 1064 aa16.48■□□□□ 0.23
PCIF1-202ENST00000479348 HOXA7P31268 230 aaPredicted RBP16.48■□□□□ 0.23
PCIF1-202ENST00000479348 ATP2B2Q01814 1243 aa16.48■□□□□ 0.23
PCIF1-202ENST00000479348 RALYLQ86SE5 291 aaKnown RBP16.48■□□□□ 0.23
PCIF1-202ENST00000479348 VCPKMTQ9H867 229 aa16.48■□□□□ 0.23
PCIF1-202ENST00000479348 IL17RBQ9NRM6 502 aa16.48■□□□□ 0.23
PCIF1-202ENST00000479348 ZSWIM5Q9P217 1185 aa16.48■□□□□ 0.23
PCIF1-202ENST00000479348 TRPA1O75762 1119 aa16.47■□□□□ 0.23
PCIF1-202ENST00000479348 KRT32Q14532 448 aa16.47■□□□□ 0.23
PCIF1-202ENST00000479348 DGKHQ86XP1 1220 aa16.47■□□□□ 0.23
PCIF1-202ENST00000479348 CLEC10AQ8IUN9 316 aa16.47■□□□□ 0.23
PCIF1-202ENST00000479348 KCNB2Q92953 911 aa16.47■□□□□ 0.23
PCIF1-202ENST00000479348 ZFYVE28Q9HCC9 887 aa16.47■□□□□ 0.23
PCIF1-202ENST00000479348 PNMA3Q9UL41 463 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms