RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 CDAN1Q8IWY9 1227 aa13.82□□□□□ -0.2
PDCD11-204ENST00000478543 SLC44A5Q8NCS7 719 aa13.82□□□□□ -0.2
PDCD11-204ENST00000478543 SLC17A8Q8NDX2 589 aa13.82□□□□□ -0.2
PDCD11-204ENST00000478543 SHISA4Q96DD7 197 aa13.82□□□□□ -0.2
PDCD11-204ENST00000478543 NEK1Q96PY6 1258 aa13.82□□□□□ -0.2
PDCD11-204ENST00000478543 DEFB129Q9H1M3 183 aa13.82□□□□□ -0.2
PDCD11-204ENST00000478543 DHX36Q9H2U1 1008 aaKnown RBP13.82□□□□□ -0.2
PDCD11-204ENST00000478543 RNF41Q9H4P4 317 aaPredicted RBP13.82□□□□□ -0.2
PDCD11-204ENST00000478543 SIPA1L1O43166 1804 aa13.82□□□□□ -0.2
PDCD11-204ENST00000478543 TESPA1A2RU30 521 aaPredicted RBP13.81□□□□□ -0.2
PDCD11-204ENST00000478543 FAM196BA6NMK8 535 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 B4E1Z4 1266 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 PSMA5P28066 241 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 PDE4BQ07343 736 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 TRDNQ13061 729 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 RABEP1Q15276 862 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 BLOC1S2Q6QNY1 142 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 CRACR2BQ8N4Y2 399 aaPredicted RBP13.81□□□□□ -0.2
PDCD11-204ENST00000478543 NCOA7Q8NI08 942 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 NKX2-3Q8TAU0 364 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 SH3TC2Q8TF17 1288 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 CNKSR2Q8WXI2 1034 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 IL17RAQ96F46 866 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 TMEM106CQ9BVX2 250 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 TRIM34Q9BYJ4 488 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 ARHGAP39Q9C0H5 1083 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDCD11-204ENST00000478543 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
PDCD11-204ENST00000478543 ATRNL1Q5VV63 1379 aa13.81□□□□□ -0.2
PDCD11-204ENST00000478543 SOX1O00570 391 aaPredicted RBP13.8□□□□□ -0.2
PDCD11-204ENST00000478543 CDK8P49336 464 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 SLC9C1Q4G0N8 1177 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 NBPF12Q5TAG4 269 aaPredicted RBP13.8□□□□□ -0.2
PDCD11-204ENST00000478543 C16orf86Q6ZW13 317 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 CHST3Q7LGC8 479 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 MS4A4AQ96JQ5 239 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 TCEANC2Q96MN5 208 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 TM6SF1Q9BZW5 370 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 CNNM2Q9H8M5 875 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 MKNK2Q9HBH9 465 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 PI4KBQ9UBF8 816 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 SERPINB13Q9UIV8 391 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 CYP46A1Q9Y6A2 500 aa13.8□□□□□ -0.2
PDCD11-204ENST00000478543 RANBP6O60518 1105 aaKnown RBP13.79□□□□□ -0.2
PDCD11-204ENST00000478543 KDM4AO75164 1064 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 USP2O75604 605 aaPredicted RBP13.79□□□□□ -0.2
PDCD11-204ENST00000478543 RPS6KB1P23443 525 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 NEK4P51957 841 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 FAM47AQ5JRC9 791 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 RUFY3Q7L099 469 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 CYB5R4Q7L1T6 521 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 MB21D2Q8IYB1 491 aaPredicted RBP13.79□□□□□ -0.2
PDCD11-204ENST00000478543 LRRC2Q9BYS8 371 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 KRT23Q9C075 422 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 EHD4Q9H223 541 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 DNAJC18Q9H819 358 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 ZSWIM6Q9HCJ5 1215 aa13.79□□□□□ -0.2
PDCD11-204ENST00000478543 PRC1O43663 620 aa13.78□□□□□ -0.2
PDCD11-204ENST00000478543 ORC4O43929 436 aa13.78□□□□□ -0.2
PDCD11-204ENST00000478543 RASA1P20936 1047 aa13.78□□□□□ -0.2
PDCD11-204ENST00000478543 GABPAQ06546 454 aa13.78□□□□□ -0.2
PDCD11-204ENST00000478543 NOL8Q76FK4 1167 aaKnown RBP13.78□□□□□ -0.2
PDCD11-204ENST00000478543 FOXP4Q8IVH2 680 aaPredicted RBP13.78□□□□□ -0.2
PDCD11-204ENST00000478543 ESR2Q92731 530 aa13.78□□□□□ -0.2
PDCD11-204ENST00000478543 TEPSINQ96N21 525 aa13.78□□□□□ -0.2
PDCD11-204ENST00000478543 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.78□□□□□ -0.2
PDCD11-204ENST00000478543 PDRG1Q9NUG6 133 aa13.78□□□□□ -0.2
PDCD11-204ENST00000478543 SWAP70Q9UH65 585 aa13.78□□□□□ -0.2
PDCD11-204ENST00000478543 LAMA2P24043 3122 aaKnown RBP13.78□□□□□ -0.2
PDCD11-204ENST00000478543 HMGB1P09429 215 aaKnown RBP13.77□□□□□ -0.21
PDCD11-204ENST00000478543 FGRP09769 529 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 PCP11498 1178 aaKnown RBP13.77□□□□□ -0.21
PDCD11-204ENST00000478543 MCM5P33992 734 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 SHMT1P34896 483 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 ANTXR2P58335 489 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 MTFR1Q15390 333 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 MIGA2Q7L4E1 593 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 DHX32Q7L7V1 743 aaKnown RBP13.77□□□□□ -0.21
PDCD11-204ENST00000478543 UBE2Q1Q7Z7E8 422 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 CUL9Q8IWT3 2517 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 ZNF444Q8N0Y2 327 aaPredicted RBP13.77□□□□□ -0.21
PDCD11-204ENST00000478543 BRI3BPQ8WY22 251 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 ZKSCAN3Q9BRR0 538 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 ELP3Q9H9T3 547 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 ZNF287Q9HBT7 754 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 PPP2R3BQ9Y5P8 575 aa13.77□□□□□ -0.21
PDCD11-204ENST00000478543 MYH8P13535 1937 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 TSPY2A6NKD2 308 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 CTGFP29279 349 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 FGD1P98174 961 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 TFAP4Q01664 338 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 Q6ZUG5 572 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 FAM43AQ8N2R8 423 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 OPTNQ96CV9 577 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 LRCH3Q96II8 777 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 ZSWIM5Q9P217 1185 aa13.76□□□□□ -0.21
PDCD11-204ENST00000478543 HERC5Q9UII4 1024 aaKnown RBP13.76□□□□□ -0.21
PDCD11-204ENST00000478543 MPHOSPH10O00566 681 aaKnown RBP13.75□□□□□ -0.21
PDCD11-204ENST00000478543 ST18O60284 1047 aa13.75□□□□□ -0.21
PDCD11-204ENST00000478543 GDF11O95390 407 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms