RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 PLEKHH3Q7Z736 793 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 TRMT2AQ8IZ69 625 aaKnown RBP12.06□□□□□ -0.48
COL4A5-204ENST00000477429 SOCS4Q8WXH5 440 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 TTYH1Q9H313 450 aaPredicted RBP12.06□□□□□ -0.48
COL4A5-204ENST00000477429 PI4KBQ9UBF8 816 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 HERC5Q9UII4 1024 aaKnown RBP12.06□□□□□ -0.48
COL4A5-204ENST00000477429 CDK5RAP2Q96SN8 1893 aa12.06□□□□□ -0.48
COL4A5-204ENST00000477429 LTBP2Q14767 1821 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 USP17L10C9JJH3 530 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 MAPK4P31152 587 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 RGS2P41220 211 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 MAP2K5Q13163 448 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 MTX1Q13505 466 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 ZYXQ15942 572 aaKnown RBP12.05□□□□□ -0.48
COL4A5-204ENST00000477429 ACER1Q8TDN7 264 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 UHRF1Q96T88 793 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-204ENST00000477429 APBA2Q99767 749 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 TBC1D2Q9BYX2 928 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 SEMA6BQ9H3T3 888 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 AS3MTQ9HBK9 375 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 PIH1D3Q9NQM4 214 aaKnown RBP12.05□□□□□ -0.48
COL4A5-204ENST00000477429 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
COL4A5-204ENST00000477429 MYO5AQ9Y4I1 1855 aaKnown RBP12.04□□□□□ -0.48
COL4A5-204ENST00000477429 GH2P01242 217 aa12.04□□□□□ -0.48
COL4A5-204ENST00000477429 CYP2E1P05181 493 aaPredicted RBP12.04□□□□□ -0.48
COL4A5-204ENST00000477429 LDHCP07864 332 aa12.04□□□□□ -0.48
COL4A5-204ENST00000477429 ASNSP08243 561 aa12.04□□□□□ -0.48
COL4A5-204ENST00000477429 GSTO1P78417 241 aa12.04□□□□□ -0.48
COL4A5-204ENST00000477429 ANO1Q5XXA6 986 aa12.04□□□□□ -0.48
COL4A5-204ENST00000477429 SH3RF1Q7Z6J0 888 aa12.04□□□□□ -0.48
COL4A5-204ENST00000477429 NECAB3Q96P71 396 aaPredicted RBP12.04□□□□□ -0.48
COL4A5-204ENST00000477429 DBNDD2Q9BQY9 259 aa12.04□□□□□ -0.48
COL4A5-204ENST00000477429 SPTBN4Q9H254 2564 aa12.04□□□□□ -0.48
COL4A5-204ENST00000477429 C19orf81C9J6K1 198 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 FOSL2P15408 326 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 PTPREP23469 700 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 ITGB8P26012 769 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 GUCY1A2P33402 732 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 RTP1P59025 263 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 PPP4CP60510 307 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 PDE3AQ14432 1141 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 GJC2Q5T442 439 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-204ENST00000477429 EDC3Q96F86 508 aaKnown RBP12.03□□□□□ -0.48
COL4A5-204ENST00000477429 EPHX3Q9H6B9 360 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 LRP2BPQ9P2M1 347 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 DDX20Q9UHI6 824 aaKnown RBP12.03□□□□□ -0.48
COL4A5-204ENST00000477429 AKAP2Q9Y2D5 859 aa12.03□□□□□ -0.48
COL4A5-204ENST00000477429 WDFY4Q6ZS81 3184 aa12.02□□□□□ -0.48
COL4A5-204ENST00000477429 TRIM43BA6NCK2 446 aa12.02□□□□□ -0.49
COL4A5-204ENST00000477429 MAP4K4O95819 1239 aaPredicted RBP12.02□□□□□ -0.49
COL4A5-204ENST00000477429 ZAP70P43403 619 aa12.02□□□□□ -0.49
COL4A5-204ENST00000477429 EPHB4P54760 987 aa12.02□□□□□ -0.49
COL4A5-204ENST00000477429 KIAA1755Q5JYT7 1200 aa12.02□□□□□ -0.49
COL4A5-204ENST00000477429 PRAMEF19Q5SWL8 479 aa12.02□□□□□ -0.49
COL4A5-204ENST00000477429 NAA16Q6N069 864 aaPredicted RBP12.02□□□□□ -0.49
COL4A5-204ENST00000477429 FOXP4Q8IVH2 680 aaPredicted RBP12.02□□□□□ -0.49
COL4A5-204ENST00000477429 TRIM43Q96BQ3 446 aaPredicted RBP12.02□□□□□ -0.49
COL4A5-204ENST00000477429 DHX36Q9H2U1 1008 aaKnown RBP12.02□□□□□ -0.49
COL4A5-204ENST00000477429 TLR7Q9NYK1 1049 aaKnown RBP12.02□□□□□ -0.49
COL4A5-204ENST00000477429 FOCADQ5VW36 1801 aa12.02□□□□□ -0.49
COL4A5-204ENST00000477429 TCF20Q9UGU0 1960 aaKnown RBP12.01□□□□□ -0.49
COL4A5-204ENST00000477429 SPDYE16A6NNV3 312 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-204ENST00000477429 CYBAP13498 195 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 VCAM1P19320 739 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 CNGA1P29973 690 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 RARSP54136 660 aaKnown RBP12.01□□□□□ -0.49
COL4A5-204ENST00000477429 GRB14Q14449 540 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 GORABQ5T7V8 394 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L2Q6R6M4 530 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 CATSPERGQ6ZRH7 1159 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 TRMT44Q8IYL2 757 aaKnown RBP12.01□□□□□ -0.49
COL4A5-204ENST00000477429 CRACR2BQ8N4Y2 399 aaPredicted RBP12.01□□□□□ -0.49
COL4A5-204ENST00000477429 BADQ92934 168 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 C12orf42Q96LP6 360 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 API5Q9BZZ5 524 aaKnown RBP12.01□□□□□ -0.49
COL4A5-204ENST00000477429 ATP11BQ9Y2G3 1177 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 RABGAP1Q9Y3P9 1069 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 CHD8Q9HCK8 2581 aa12.01□□□□□ -0.49
COL4A5-204ENST00000477429 RLFQ13129 1914 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 USP34Q70CQ2 3546 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 SLC15A5A6NIM6 579 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 COBLO75128 1261 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 HOXC6P09630 235 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 TRIM60Q495X7 471 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 WDR78Q5VTH9 848 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 TATDN1Q6P1N9 297 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 SLC39A5Q6ZMH5 540 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 MIGA1Q8NAN2 632 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 LPAR1Q92633 364 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 COL26A1Q96A83 441 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 C11orf16Q9NQ32 467 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 PDLIM7Q9NR12 457 aa12□□□□□ -0.49
COL4A5-204ENST00000477429 A0A1W2PRG0 241 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L13C9JLJ4 530 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L11C9JVI0 530 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L18D6R9N7 530 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L22D6RA61 530 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L17D6RBQ6 530 aa11.99□□□□□ -0.49
COL4A5-204ENST00000477429 USP17L19D6RCP7 530 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms