RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 TMEM238LA0A1B0GVL6 79 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 MAP7Q14244 749 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 RETREG2Q8NC44 543 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 DDX54Q8TDD1 881 aaKnown RBP6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 C14orf93Q9H972 538 aaKnown RBP6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 ZFYVE1Q9HBF4 777 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 LRRC4CQ9HCJ2 640 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 C1GALT1Q9NS00 363 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 RAD18Q9NS91 495 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 STK26Q9P289 416 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 PPP1R9AQ9ULJ8 1098 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 AP4E1Q9UPM8 1137 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 EIF3AQ14152 1382 aaKnown RBP6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 PPLO60437 1756 aa6.29□□□□□ -1.4
NSMCE4A-208ENST00000477289 ZNF335Q9H4Z2 1342 aaPredicted RBP6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 BIN1O00499 593 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 FARP2O94887 1054 aaPredicted RBP6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 ASPAP45381 313 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 GRM2Q14416 872 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 PLCL1Q15111 1095 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 RPS26P11Q5JNZ5 115 aaPredicted RBP6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 DUSP27Q5VZP5 1158 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 ZNF765Q7L2R6 523 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 EPS8L3Q8TE67 593 aaKnown RBP6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 WDR89Q96FK6 387 aaPredicted RBP6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 CARD11Q9BXL7 1154 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 CPS1P31327 1500 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 STRCQ7RTU9 1775 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 ROCK2O75116 1388 aaKnown RBP6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 LAMC1P11047 1609 aa6.28□□□□□ -1.4
NSMCE4A-208ENST00000477289 SYNGAP1Q96PV0 1343 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 SETBP1Q9Y6X0 1596 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 PIK3C2GO75747 1445 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 TOM1O60784 492 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 GADD45BO75293 160 aaPredicted RBP6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 ATF3P18847 181 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 ZNF157P51786 506 aaPredicted RBP6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 AP3B2Q13367 1082 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 PDE3AQ14432 1141 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 ZNF792Q3KQV3 632 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 BCL7CQ8WUZ0 217 aaPredicted RBP6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 ALKBH8Q96BT7 664 aaKnown RBP6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 CSRNP1Q96S65 589 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 RBCK1Q9BYM8 510 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 CCDC86Q9H6F5 360 aaKnown RBP6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 MSH6P52701 1360 aa6.27□□□□□ -1.41
NSMCE4A-208ENST00000477289 ADAMTS13Q76LX8 1427 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 ALKQ9UM73 1620 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 TMPRSS2O15393 492 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 ZNF862O60290 1169 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 LIG1P18858 919 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 CYP27A1Q02318 531 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 PKN1Q16512 942 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 TMEM132EQ6IEE7 984 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 ZNF574Q6ZN55 896 aaPredicted RBP6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 WFDC3Q8IUB2 231 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 TMC1Q8TDI8 760 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 ARID3AQ99856 593 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 LGR6Q9HBX8 967 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 TRAK1Q9UPV9 953 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 DAGLAQ9Y4D2 1042 aa6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 LRPPRCP42704 1394 aaKnown RBP6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 NKTRP30414 1462 aaKnown RBP6.26□□□□□ -1.41
NSMCE4A-208ENST00000477289 PRAG1Q86YV5 1406 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 PI16Q6UXB8 463 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 DMRTB1Q96MA1 342 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 ZC3H12CQ9C0D7 883 aaKnown RBP6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 C19orf44Q9H6X5 657 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 CRIM1Q9NZV1 1036 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 PCDHGC5Q9Y5F6 944 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 METP08581 1390 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 ABCC11Q96J66 1382 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 IFT172Q9UG01 1749 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 YTHDC2Q9H6S0 1430 aaKnown RBP6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 NCOA3Q9Y6Q9 1424 aa6.25□□□□□ -1.41
NSMCE4A-208ENST00000477289 NRXN1Q9ULB1 1477 aa6.24□□□□□ -1.41
NSMCE4A-208ENST00000477289 TMEM94Q12767 1356 aa6.24□□□□□ -1.41
NSMCE4A-208ENST00000477289 SOWAHDA6NJG2 315 aa6.24□□□□□ -1.41
NSMCE4A-208ENST00000477289 OGFOD3Q6PK18 319 aa6.24□□□□□ -1.41
NSMCE4A-208ENST00000477289 SPRED2Q7Z698 418 aa6.24□□□□□ -1.41
NSMCE4A-208ENST00000477289 KSR1Q8IVT5 923 aa6.24□□□□□ -1.41
NSMCE4A-208ENST00000477289 PRAM1Q96QH2 718 aa6.24□□□□□ -1.41
NSMCE4A-208ENST00000477289 CENPJQ9HC77 1338 aaPredicted RBP6.24□□□□□ -1.41
NSMCE4A-208ENST00000477289 IQSEC2Q5JU85 1478 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 GSTP1P09211 210 aaKnown RBP6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 SAFB2Q14151 953 aaKnown RBP eCLIP6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 KIF4BQ2VIQ3 1234 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 TMC7Q7Z402 723 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 ATG4DQ86TL0 474 aaPredicted RBP6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 PDZD3Q86UT5 571 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 STK11IPQ8N1F8 1099 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 FAM168AQ92567 244 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 FANCD2OSQ96PS1 177 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 DISC1Q9NRI5 854 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 PTCH1Q13635 1447 aa6.23□□□□□ -1.41
NSMCE4A-208ENST00000477289 FAM135BQ49AJ0 1406 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms