RNA–Protein interactions for RNA: ENST00000476961.5

CNTNAP3B-205, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 2,643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-205ENST00000476961 GBP2P32456 591 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 KRT72Q14CN4 511 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CCDC92Q53HC0 331 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 RC3H1Q5TC82 1133 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 GALNT17Q6IS24 598 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 DPY19L2Q6NUT2 758 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SLC4A10Q6U841 1118 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HOOK3Q86VS8 718 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SLF2Q8IX21 1173 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SYCP3Q8IZU3 236 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CEP112Q8N8E3 955 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SLC43A3Q8NBI5 491 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CLIP3Q96DZ5 547 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ARFGAP3Q9NP61 516 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 KLC4Q9NSK0 619 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SPO11Q9Y5K1 396 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CACNA1FO60840 1977 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SH3BP5O60239 455 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SMNDC1O75940 238 aaKnown RBP eCLIP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MAP4K4O95819 1239 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ACTN3Q08043 901 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 APOBRQ0VD83 1088 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CNNM3Q8NE01 707 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 DTNBP1Q96EV8 351 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 RSRC1Q96IZ7 334 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 RUFY1Q96T51 708 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SLC7A5P2Q9GIP4 190 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 YIPF3Q9GZM5 350 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 BICC1Q9H694 974 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 NRBP1Q9UHY1 535 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CORO1CQ9ULV4 474 aaPredicted RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ATXN2Q99700 1313 aaKnown RBP9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ATRNO75882 1429 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ITGB4P16144 1822 aa9.36□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HMMRO75330 724 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 BDNFP23560 247 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CCT4P50991 539 aaKnown RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 GJC2Q5T442 439 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 TMCO4Q5TGY1 634 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 LARP1BQ659C4 914 aaKnown RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 LRP10Q7Z4F1 713 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 JAKMIP2Q96AA8 810 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 SYTL4Q96C24 671 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 GJD4Q96KN9 370 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HYPKQ9NX55 129 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 TUBGCP4Q9UGJ1 667 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ADCY9O60503 1353 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 A0A1B0GVG6 124 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 EBAG9O00559 213 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 IBSPP21815 317 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CUL3Q13618 768 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CCDC170Q8IYT3 715 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CEP57L1Q8IYX8 460 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 GALNT15Q8N3T1 639 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ANKK1Q8NFD2 765 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HOOK2Q96ED9 719 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CHAMP1Q96JM3 812 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 KCND1Q9NSA2 647 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 THSD7AQ9UPZ6 1657 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PI4KAP2A4QPH2 592 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MYL6BP14649 208 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PIP4K2AP48426 406 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CLCN2P51788 898 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PDE4BQ07343 736 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ARHGAP27Q6ZUM4 889 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CEP57Q86XR8 500 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MYO1HQ8N1T3 1032 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PI4KAP1Q8N8J0 262 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CACTINQ8WUQ7 758 aaKnown RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ACSBG1Q96GR2 724 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 MEIS3Q99687 375 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 FUCA2Q9BTY2 467 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 GINM1Q9NU53 330 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 FAN1Q9Y2M0 1017 aa9.35□□□□□ -0.91
CNTNAP3B-205ENST00000476961 DOT1LQ8TEK3 1739 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PXDNLA1KZ92 1463 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CEP104O60308 925 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 PPFIA3O75145 1194 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 TADA3O75528 432 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 ENPP1P22413 925 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HOXD11P31277 338 aaPredicted RBP9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CUL4BQ13620 913 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CCDC183Q5T5S1 534 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CCDC73Q6ZRK6 1079 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 BRAPQ7Z569 592 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 RNF168Q8IYW5 571 aaPredicted RBP9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CLASRPQ8N2M8 674 aaKnown RBP9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 HOXC10Q9NYD6 342 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 TFIP11Q9UBB9 837 aaKnown RBP9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 TRPC5Q9UL62 973 aaPredicted RBP9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 A0A0G2JS52 829 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 NBPF26B4DH59 902 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 CREB3O43889 395 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 RASSF9O75901 435 aa9.34□□□□□ -0.91
CNTNAP3B-205ENST00000476961 YY1P25490 414 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms