RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 TMTC3Q6ZXV5 915 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 LRRC8AQ8IWT6 810 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 IL17RBQ9NRM6 502 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 ADAMTS3O15072 1205 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 SERPINB2P05120 415 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 LMOD1P29536 600 aaPredicted RBP19.1■□□□□ 0.65
TVP23B-202ENST00000476139 HSPA1LP34931 641 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 TFAP4Q01664 338 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 TPD52L1Q16890 204 aaPredicted RBP19.1■□□□□ 0.65
TVP23B-202ENST00000476139 WDR66Q8TBY9 1149 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 TGFBRAP1Q8WUH2 860 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 BPIFA3Q9BQP9 254 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 RBM28Q9NW13 759 aaKnown RBP19.1■□□□□ 0.65
TVP23B-202ENST00000476139 TAF1LQ8IZX4 1826 aa19.1■□□□□ 0.65
TVP23B-202ENST00000476139 USP27XA6NNY8 438 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 NPY5RQ15761 445 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 XBP1P17861 261 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 BMP6P22004 513 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 MDM2Q00987 491 aaPredicted RBP19.09■□□□□ 0.65
TVP23B-202ENST00000476139 C12orf60Q5U649 245 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 GRAMD1CQ8IYS0 662 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 SLC44A5Q8NCS7 719 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 CTCFLQ8NI51 663 aaPredicted RBP19.09■□□□□ 0.65
TVP23B-202ENST00000476139 XPO4Q9C0E2 1151 aaKnown RBP19.09■□□□□ 0.65
TVP23B-202ENST00000476139 CSRNP2Q9H175 543 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 HSD3B7Q9H2F3 369 aa19.09■□□□□ 0.65
TVP23B-202ENST00000476139 TRMT1Q9NXH9 659 aaKnown RBP19.09■□□□□ 0.65
TVP23B-202ENST00000476139 DDAH1O94760 285 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 CALM1P0DP23 149 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 CALM2P0DP24 149 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 CALM3P0DP25 149 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 ATP1A3P13637 1013 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 TNNT1P13805 278 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 KRT2P35908 639 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 PLCD1P51178 756 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 IFNKQ9P0W0 207 aa19.08■□□□□ 0.65
TVP23B-202ENST00000476139 UFL1O94874 794 aa19.08■□□□□ 0.64
TVP23B-202ENST00000476139 SERTAD1Q9UHV2 236 aa19.08■□□□□ 0.64
TVP23B-202ENST00000476139 SRPRBQ9Y5M8 271 aaKnown RBP19.08■□□□□ 0.64
TVP23B-202ENST00000476139 USP17L3A6NCW0 530 aa19.08■□□□□ 0.64
TVP23B-202ENST00000476139 USP17L4A6NCW7 530 aa19.08■□□□□ 0.64
TVP23B-202ENST00000476139 SMC2O95347 1197 aa19.08■□□□□ 0.64
TVP23B-202ENST00000476139 USP17L1Q7RTZ2 530 aa19.08■□□□□ 0.64
TVP23B-202ENST00000476139 ZNF804AQ7Z570 1209 aa19.08■□□□□ 0.64
TVP23B-202ENST00000476139 SAP30BPQ9UHR5 308 aaKnown RBP19.08■□□□□ 0.64
TVP23B-202ENST00000476139 MTMR7Q9Y216 660 aa19.08■□□□□ 0.64
TVP23B-202ENST00000476139 CNTNAP5Q8WYK1 1306 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 LY75O60449 1722 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 NAA30Q147X3 362 aaPredicted RBP19.07■□□□□ 0.64
TVP23B-202ENST00000476139 MAP7D2Q96T17 732 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 CD209Q9NNX6 404 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 TRIM37O94972 964 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 PRR29P0C7W0 189 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 CRY2Q49AN0 593 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 MAPKAPK5Q8IW41 473 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 EPSTI1Q96J88 318 aa19.07■□□□□ 0.64
TVP23B-202ENST00000476139 ZNF174Q15697 407 aa19.06■□□□□ 0.64
TVP23B-202ENST00000476139 STAG2Q8N3U4 1231 aa19.06■□□□□ 0.64
TVP23B-202ENST00000476139 TRPC5Q9UL62 973 aaPredicted RBP19.06■□□□□ 0.64
TVP23B-202ENST00000476139 TRIM75PA6NK02 468 aa19.06■□□□□ 0.64
TVP23B-202ENST00000476139 SKILP12757 684 aa19.06■□□□□ 0.64
TVP23B-202ENST00000476139 QTRT2Q9H974 415 aaKnown RBP19.06■□□□□ 0.64
TVP23B-202ENST00000476139 MKNK2Q9HBH9 465 aa19.06■□□□□ 0.64
TVP23B-202ENST00000476139 ADRA2BP18089 450 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 GTF2F1P35269 517 aaKnown RBP eCLIP19.05■□□□□ 0.64
TVP23B-202ENST00000476139 POLLQ9UGP5 575 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 A0A087X0B3 334 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 DDR1Q08345 913 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 PTPN21Q16825 1174 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 ZNF827Q17R98 1081 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 HSP90AA4PQ58FG1 418 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 CERKQ8TCT0 537 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 TNFRSF25Q93038 417 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 ZMYND15Q9H091 742 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 CEP131Q9UPN4 1083 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 SBF2Q86WG5 1849 aa19.05■□□□□ 0.64
TVP23B-202ENST00000476139 SMTNL1A8MU46 457 aa19.04■□□□□ 0.64
TVP23B-202ENST00000476139 BAG3O95817 575 aa19.04■□□□□ 0.64
TVP23B-202ENST00000476139 ST5P78524 1137 aa19.04■□□□□ 0.64
TVP23B-202ENST00000476139 POSTNQ15063 836 aa19.04■□□□□ 0.64
TVP23B-202ENST00000476139 ZNF579Q8NAF0 562 aaKnown RBP19.04■□□□□ 0.64
TVP23B-202ENST00000476139 KAT14Q9H8E8 782 aa19.04■□□□□ 0.64
TVP23B-202ENST00000476139 PRDM10Q9NQV6 1147 aa19.04■□□□□ 0.64
TVP23B-202ENST00000476139 SCG2P13521 617 aa19.04■□□□□ 0.64
TVP23B-202ENST00000476139 RTFDC1Q9BY42 306 aaPredicted RBP19.04■□□□□ 0.64
TVP23B-202ENST00000476139 GGA1Q9UJY5 639 aa19.04■□□□□ 0.64
TVP23B-202ENST00000476139 NLRP5P59047 1200 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 PIK3AP1Q6ZUJ8 805 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 PNMA1Q8ND90 353 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 MYH6P13533 1939 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 IKBKBO14920 756 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 BTDP43251 543 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 FANCCQ00597 558 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 DPF2Q92785 391 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 GPKOWQ92917 476 aaPredicted RBP eCLIP19.03■□□□□ 0.64
TVP23B-202ENST00000476139 FANCLQ9NW38 375 aa19.03■□□□□ 0.64
TVP23B-202ENST00000476139 ACTN4O43707 911 aaKnown RBP19.02■□□□□ 0.64
TVP23B-202ENST00000476139 TSPY3P0CV98 308 aa19.02■□□□□ 0.64
TVP23B-202ENST00000476139 TSPY8P0CW00 308 aa19.02■□□□□ 0.64
TVP23B-202ENST00000476139 PPP4CP60510 307 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms