RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 SH3RF3Q8TEJ3 882 aaPredicted RBP16.16■□□□□ 0.18
UBXN11-214ENST00000475591 SRPRBQ9Y5M8 271 aaKnown RBP16.16■□□□□ 0.18
UBXN11-214ENST00000475591 TAF1LQ8IZX4 1826 aa16.16■□□□□ 0.18
UBXN11-214ENST00000475591 KIAA1551Q9HCM1 1747 aa16.16■□□□□ 0.18
UBXN11-214ENST00000475591 BAZ2BQ9UIF8 2168 aaKnown RBP16.16■□□□□ 0.18
UBXN11-214ENST00000475591 A0A087X0B3 334 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 IKBKBO14920 756 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 TNNT1P13805 278 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 GRAPQ13588 217 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 PPP2R5BQ15173 497 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 CNBD1Q8NA66 436 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 GRAPLQ8TC17 118 aaPredicted RBP16.15■□□□□ 0.18
UBXN11-214ENST00000475591 RBM28Q9NW13 759 aaKnown RBP16.15■□□□□ 0.18
UBXN11-214ENST00000475591 TRMT1Q9NXH9 659 aaKnown RBP16.15■□□□□ 0.18
UBXN11-214ENST00000475591 ARPP21Q9UBL0 812 aaPredicted RBP16.15■□□□□ 0.18
UBXN11-214ENST00000475591 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 SBF2Q86WG5 1849 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 DDAH1O94760 285 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 PCP11498 1178 aaKnown RBP16.15■□□□□ 0.18
UBXN11-214ENST00000475591 POSTNQ15063 836 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 RCSD1Q6JBY9 416 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 ARMCX5Q6P1M9 558 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 EPSTI1Q96J88 318 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 MAN1B1Q9UKM7 699 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 LAMB1P07942 1786 aa16.15■□□□□ 0.18
UBXN11-214ENST00000475591 TRIM75PA6NK02 468 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 LDHBP07195 334 aaKnown RBP16.14■□□□□ 0.17
UBXN11-214ENST00000475591 XBP1P17861 261 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 GTF2F1P35269 517 aaKnown RBP eCLIP16.14■□□□□ 0.17
UBXN11-214ENST00000475591 TPM4P67936 248 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 MYL5Q02045 173 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 ARID3AQ99856 593 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 FANCLQ9NW38 375 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 ACTN4O43707 911 aaKnown RBP16.14■□□□□ 0.17
UBXN11-214ENST00000475591 CALM1P0DP23 149 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 CALM2P0DP24 149 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 CALM3P0DP25 149 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 ZNF174Q15697 407 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 ZNF710Q8N1W2 664 aa16.14■□□□□ 0.17
UBXN11-214ENST00000475591 CTCFLQ8NI51 663 aaPredicted RBP16.14■□□□□ 0.17
UBXN11-214ENST00000475591 OSBPL5Q9H0X9 879 aaPredicted RBP16.14■□□□□ 0.17
UBXN11-214ENST00000475591 MAST2Q6P0Q8 1798 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 CASP1P29466 404 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 USP5P45974 858 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 SBK1Q52WX2 424 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 PRR5LQ6MZQ0 368 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 SLC44A5Q8NCS7 719 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 TNFRSF25Q93038 417 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 IL17RBQ9NRM6 502 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 MKRN1Q9UHC7 482 aaKnown RBP16.13■□□□□ 0.17
UBXN11-214ENST00000475591 CEP131Q9UPN4 1083 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 LY75O60449 1722 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.13■□□□□ 0.17
UBXN11-214ENST00000475591 NEMFO60524 1076 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 TFAP4Q01664 338 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 FMR1Q06787 632 aaKnown RBP eCLIP16.13■□□□□ 0.17
UBXN11-214ENST00000475591 OLFM4Q6UX06 510 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 GJD4Q96KN9 370 aaPredicted RBP16.13■□□□□ 0.17
UBXN11-214ENST00000475591 MTMR7Q9Y216 660 aa16.13■□□□□ 0.17
UBXN11-214ENST00000475591 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 TMEM232C9JQI7 657 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 GPSM2P81274 684 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 TRMT44Q8IYL2 757 aaKnown RBP16.12■□□□□ 0.17
UBXN11-214ENST00000475591 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
UBXN11-214ENST00000475591 ZNF592Q92610 1267 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 DHX58Q96C10 678 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 BCL11BQ9C0K0 894 aaPredicted RBP16.12■□□□□ 0.17
UBXN11-214ENST00000475591 SAP30BPQ9UHR5 308 aaKnown RBP16.12■□□□□ 0.17
UBXN11-214ENST00000475591 USP17L3A6NCW0 530 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 USP17L4A6NCW7 530 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 SERPINC1P01008 464 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 GOLGA8FQ08AF8 430 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 GOLGA8DPQ0D2H9 430 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 C12orf60Q5U649 245 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 SPTY2D1Q68D10 685 aaPredicted RBP16.12■□□□□ 0.17
UBXN11-214ENST00000475591 USP17L1Q7RTZ2 530 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 STAG2Q8N3U4 1231 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 TGFBRAP1Q8WUH2 860 aa16.12■□□□□ 0.17
UBXN11-214ENST00000475591 UBASH3AP57075 661 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 GSDMDP57764 484 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 SYMPKQ92797 1274 aaKnown RBP16.11■□□□□ 0.17
UBXN11-214ENST00000475591 IMPACTQ9P2X3 320 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 LEMD3Q9Y2U8 911 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 XDHP47989 1333 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 SCG2P13521 617 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 AFMP43652 599 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 SARSP49591 514 aaKnown RBP16.11■□□□□ 0.17
UBXN11-214ENST00000475591 PLCD1P51178 756 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 PIK3AP1Q6ZUJ8 805 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 MAPKAPK5Q8IW41 473 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 WDR66Q8TBY9 1149 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 GPKOWQ92917 476 aaPredicted RBP eCLIP16.11■□□□□ 0.17
UBXN11-214ENST00000475591 SMARCE1Q969G3 411 aa16.11■□□□□ 0.17
UBXN11-214ENST00000475591 NLRP5P59047 1200 aa16.1■□□□□ 0.17
UBXN11-214ENST00000475591 CFAP100Q494V2 611 aa16.1■□□□□ 0.17
UBXN11-214ENST00000475591 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
UBXN11-214ENST00000475591 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
UBXN11-214ENST00000475591 MED15Q96RN5 788 aa16.1■□□□□ 0.17
UBXN11-214ENST00000475591 PDCL3Q9H2J4 239 aa16.1■□□□□ 0.17
UBXN11-214ENST00000475591 VWA3AA6NCI4 1184 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms