RNA–Protein interactions for RNA: ENST00000475445.1

GGA1-218, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 2,614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-218ENST00000475445 TSC1Q92574 1164 aa16.45■□□□□ 0.22
GGA1-218ENST00000475445 KIAA1551Q9HCM1 1747 aa16.45■□□□□ 0.22
GGA1-218ENST00000475445 KIF2AO00139 706 aaPredicted RBP16.44■□□□□ 0.22
GGA1-218ENST00000475445 CEP135Q66GS9 1140 aa16.44■□□□□ 0.22
GGA1-218ENST00000475445 CATIPQ7Z7H3 387 aa16.44■□□□□ 0.22
GGA1-218ENST00000475445 IQCA1Q86XH1 822 aa16.44■□□□□ 0.22
GGA1-218ENST00000475445 CCAR2Q8N163 923 aaKnown RBP16.44■□□□□ 0.22
GGA1-218ENST00000475445 ENAHQ8N8S7 591 aaPredicted RBP16.44■□□□□ 0.22
GGA1-218ENST00000475445 HSD3B7Q9H2F3 369 aa16.44■□□□□ 0.22
GGA1-218ENST00000475445 SRPRBQ9Y5M8 271 aaKnown RBP16.44■□□□□ 0.22
GGA1-218ENST00000475445 PRPF3O43395 683 aaKnown RBP16.44■□□□□ 0.22
GGA1-218ENST00000475445 MDM2Q00987 491 aaPredicted RBP16.44■□□□□ 0.22
GGA1-218ENST00000475445 RC3H1Q5TC82 1133 aaKnown RBP16.44■□□□□ 0.22
GGA1-218ENST00000475445 CELF1Q92879 486 aaKnown RBP16.44■□□□□ 0.22
GGA1-218ENST00000475445 ANKRD2Q9GZV1 360 aa16.44■□□□□ 0.22
GGA1-218ENST00000475445 DDAH1O94760 285 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 LMOD1P29536 600 aaPredicted RBP16.43■□□□□ 0.22
GGA1-218ENST00000475445 DYNLL1P63167 89 aaKnown RBP16.43■□□□□ 0.22
GGA1-218ENST00000475445 PTPN14Q15678 1187 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 IFIT1BQ5T764 474 aaKnown RBP16.43■□□□□ 0.22
GGA1-218ENST00000475445 KANK3Q6NY19 840 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 PCDHA5Q9Y5H7 936 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 SFPQP23246 707 aaKnown RBP eCLIP16.43■□□□□ 0.22
GGA1-218ENST00000475445 NR5A1Q13285 461 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 TBC1D9BQ66K14 1250 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 CCDC82Q8N4S0 544 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 CCDC112Q8NEF3 446 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 NARFQ9UHQ1 456 aa16.43■□□□□ 0.22
GGA1-218ENST00000475445 ORC4O43929 436 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 RPS8P62241 208 aaKnown RBP16.42■□□□□ 0.22
GGA1-218ENST00000475445 FUT2Q10981 343 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 NT5DC1Q5TFE4 455 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 ISM2Q6H9L7 571 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 CMTR1Q8N1G2 835 aaKnown RBP16.42■□□□□ 0.22
GGA1-218ENST00000475445 ZNF384Q8TF68 577 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 ANKRD7Q92527 254 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 NSUN4Q96CB9 384 aaKnown RBP16.42■□□□□ 0.22
GGA1-218ENST00000475445 DACH1Q9UI36 760 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 PCDHB6Q9Y5E3 794 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 BMP15O95972 392 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 POSTNQ15063 836 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 ARMCX5Q6P1M9 558 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 CTR9Q6PD62 1173 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 PTF1AQ7RTS3 328 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 FOXP4Q8IVH2 680 aaPredicted RBP16.42■□□□□ 0.22
GGA1-218ENST00000475445 TRIML1Q8N9V2 468 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 NLRP3Q96P20 1036 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 PHF20Q9BVI0 1012 aa16.42■□□□□ 0.22
GGA1-218ENST00000475445 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
GGA1-218ENST00000475445 USP27XA6NNY8 438 aa16.41■□□□□ 0.22
GGA1-218ENST00000475445 KRT2P35908 639 aa16.41■□□□□ 0.22
GGA1-218ENST00000475445 PKN1Q16512 942 aa16.41■□□□□ 0.22
GGA1-218ENST00000475445 OXER1Q8TDS5 423 aa16.41■□□□□ 0.22
GGA1-218ENST00000475445 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
GGA1-218ENST00000475445 PSDA5PKW4 1024 aaPredicted RBP16.41■□□□□ 0.22
GGA1-218ENST00000475445 WTIPA6NIX2 430 aaPredicted RBP16.41■□□□□ 0.22
GGA1-218ENST00000475445 RPS6KA4O75676 772 aa16.41■□□□□ 0.22
GGA1-218ENST00000475445 BTAF1O14981 1849 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 SARSP49591 514 aaKnown RBP16.4■□□□□ 0.22
GGA1-218ENST00000475445 UBASH3AP57075 661 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 TROAPQ12815 778 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 BICDL1Q6ZP65 573 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 SEPT12Q8IYM1 358 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 MLKLQ8NB16 471 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 CCDC34Q96HJ3 373 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 SETDB2Q96T68 719 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 BRMS1Q9HCU9 246 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 CABP5Q9NP86 173 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 ATP8A2Q9NTI2 1148 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 AATFQ9NY61 560 aaKnown RBP eCLIP16.4■□□□□ 0.22
GGA1-218ENST00000475445 MAN1B1Q9UKM7 699 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 POLR2DO15514 142 aaKnown RBP16.4■□□□□ 0.22
GGA1-218ENST00000475445 SERPINC1P01008 464 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 ATP1A3P13637 1013 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 HIBADHP31937 336 aaKnown RBP16.4■□□□□ 0.22
GGA1-218ENST00000475445 NT5C2P49902 561 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 MECOMQ03112 1051 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 GRIN1Q05586 938 aa16.4■□□□□ 0.22
GGA1-218ENST00000475445 CYP2D7A0A087X1C5 515 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 USP17L12C9JPN9 530 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 USP17L21D6R901 530 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 TUBB4AP04350 444 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 SBK1Q52WX2 424 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 SPECC1Q5M775 1068 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 TMTC3Q6ZXV5 915 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 SMARCE1Q969G3 411 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
GGA1-218ENST00000475445 SERTAD1Q9UHV2 236 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 EP400Q96L91 3159 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 NHSQ6T4R5 1651 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 NBPF5PQ86XG9 351 aaPredicted RBP16.39■□□□□ 0.21
GGA1-218ENST00000475445 SHISA4Q96DD7 197 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 VPS54Q9P1Q0 977 aa16.39■□□□□ 0.21
GGA1-218ENST00000475445 CCP110O43303 1012 aa16.38■□□□□ 0.21
GGA1-218ENST00000475445 ACTN4O43707 911 aaKnown RBP16.38■□□□□ 0.21
GGA1-218ENST00000475445 BMP6P22004 513 aa16.38■□□□□ 0.21
GGA1-218ENST00000475445 MORC3Q14149 939 aa16.38■□□□□ 0.21
GGA1-218ENST00000475445 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms